Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNA5SP122-201ENST00000384457 108 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 RNA5SP284-201ENST00000384547 118 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 HMGB1P17-201ENST00000403495 628 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 MTND3P17-201ENST00000416968 344 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 RPS4XP5-201ENST00000419038 768 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 RPL7P57-201ENST00000423238 740 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 EIF1P3-201ENST00000423841 334 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 AL589872.1-201ENST00000426602 288 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 MTND6P12-201ENST00000428247 522 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 RPEP2-201ENST00000432149 701 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 AC023347.2-201ENST00000433994 462 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 AL731534.1-201ENST00000434711 269 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 BTF3P5-201ENST00000457252 467 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 AL035690.1-201ENST00000490892 383 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 NIFKP7-201ENST00000503365 834 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 NAF1-205ENST00000509434 385 ntTSL 3 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 AC018442.3-201ENST00000523025 183 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 AC008521.2-201ENST00000591021 259 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 VN1R80P-201ENST00000597126 338 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 AC020910.2-201ENST00000603635 610 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 AL162730.1-201ENST00000605734 292 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 uc_338.9-201ENST00000617424 182 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 AL121768.1-201ENST00000613917 2544 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 AC025574.1-201ENST00000554784 1653 ntBASIC6.42□□□□□ -1.38
CNTN3Q9P232 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CNTN3Q9P232 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CNTN3Q9P232 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 WDR95P-201ENST00000425638 1542 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 RN7SKP292-201ENST00000365522 317 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 AL031985.1-201ENST00000392713 418 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 RIMKLBP2-201ENST00000424737 654 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 MTCO3P21-201ENST00000430791 643 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 RPL31P35-201ENST00000431058 377 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 KCTD9P3-201ENST00000434597 1169 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 OR52B5P-201ENST00000435337 951 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 RPL7AP52-201ENST00000458096 790 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 UBFD1P1-201ENST00000473259 814 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 AC124945.1-201ENST00000485133 188 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 AC012123.2-201ENST00000485809 248 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 RN7SL57P-201ENST00000493687 290 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 RNU6-445P-201ENST00000516949 107 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 IGKV3D-34-201ENST00000522638 302 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 BRD9P1-201ENST00000529855 560 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 AC107954.1-201ENST00000565906 727 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 MIR132-201ENST00000591554 101 ntBASIC6.41□□□□□ -1.38
CNTN3Q9P232 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CNTN3Q9P232 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.41□□□□□ -1.38
CNTN3Q9P232 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms