Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 SNORA74C-1-201ENST00000580726 201 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 RN7SL52P-201ENST00000584271 284 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 VN1R88P-201ENST00000596787 292 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 IMMP1LP1-201ENST00000605170 488 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AL158042.1-201ENST00000605338 460 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AP001521.2-201ENST00000608772 546 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC105227.2-201ENST00000615075 605 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 RN7SL722P-201ENST00000617780 284 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 RN7SL565P-201ENST00000618246 284 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC019206.1-201ENST00000621938 425 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 CASC19-204ENST00000641001 2055 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 IGKV7-3-201ENST00000357453 298 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 OR1L1-202ENST00000373686 1083 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 Y_RNA.465-201ENST00000384293 102 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 MIR525-201ENST00000384978 85 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 ARL4AP5-201ENST00000404372 599 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AP000580.1-201ENST00000404439 358 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 SNORA11C-201ENST00000408532 129 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AC016397.1-201ENST00000412463 242 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AC011233.1-201ENST00000422812 283 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 CNOT7P1-201ENST00000429006 852 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AC004938.1-201ENST00000438468 308 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 MRPL48P1-201ENST00000445390 636 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AL133477.1-201ENST00000457472 514 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 TPTE2P5-203ENST00000458118 728 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 GAPDHP56-201ENST00000506031 988 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 DUXAP1-201ENST00000556632 463 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 UBE2FP2-201ENST00000566646 462 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AL031320.1-201ENST00000604177 357 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 MIR7973-1-201ENST00000614683 76 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AL157770.1-201ENST00000623049 439 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AP003497.2-201ENST00000624220 967 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 OR8B1P-202ENST00000641132 1178 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP29Q9HBJ7 MTND4P31-201ENST00000425607 1343 ntBASIC4.97□□□□□ -1.61
USP29Q9HBJ7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
USP29Q9HBJ7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 Z98755.1-201ENST00000407015 1384 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 RNU4-44P-201ENST00000363050 141 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 RNU6-560P-201ENST00000364007 108 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 Y_RNA.318-201ENST00000365131 97 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 ATP5F1P3-201ENST00000397213 657 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 RAB28P1-201ENST00000411517 641 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC016907.1-201ENST00000419483 435 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AL365203.2-201ENST00000423444 196 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC007559.1-201ENST00000428736 355 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC005345.1-201ENST00000431868 217 ntBASIC4.96□□□□□ -1.62
USP29Q9HBJ7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms