Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 Y_RNA.497-201ENST00000384447 98 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 HSPD1P21-201ENST00000436541 245 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 AC008267.6-201ENST00000441664 139 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 AL935212.3-201ENST00000450729 284 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 AC116533.1-201ENST00000459748 321 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 AC079804.1-201ENST00000461922 436 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 AC098818.1-201ENST00000478593 252 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 AC027801.3-201ENST00000515049 698 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 IGKV2-23-201ENST00000518729 323 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 MIR4312-201ENST00000579909 76 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 MIR4271-201ENST00000582451 67 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 AC008162.1-201ENST00000604718 254 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 AL670379.4-201ENST00000605279 254 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 AC141002.1-201ENST00000607025 279 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 AC133644.2-201ENST00000608142 540 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 AL590240.4-201ENST00000616908 390 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
VARS2Q5ST30 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
VARS2Q5ST30 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC7.52□□□□□ -1.2
VARS2Q5ST30 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
VARS2Q5ST30 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARS2Q5ST30 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARS2Q5ST30 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VARS2Q5ST30 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VARS2Q5ST30 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARS2Q5ST30 RNU6-1020P-201ENST00000363684 107 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 RNU6-1059P-201ENST00000363752 98 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 RNU6-47P-201ENST00000383866 107 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 RNU6-842P-201ENST00000384269 107 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 RNU6-95P-201ENST00000384697 107 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 RNA5SP219-201ENST00000390940 113 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 RNA5SP176-201ENST00000390956 110 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 RNU6-1156P-201ENST00000410365 100 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 MRPS18BP2-201ENST00000434310 759 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC114755.4-201ENST00000439114 443 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 OR2AQ1P-201ENST00000451972 200 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 UOX-201ENST00000471089 899 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 RN7SL350P-201ENST00000492591 299 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 RPL19P11-201ENST00000495944 589 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 AL035404.1-201ENST00000497982 568 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 AL359219.2-201ENST00000555184 348 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC018552.1-201ENST00000562099 811 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC023509.5-201ENST00000617434 807 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC244100.1-202ENST00000621554 382 ntBASIC7.52□□□□□ -1.21
VARS2Q5ST30 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
VARS2Q5ST30 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARS2Q5ST30 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARS2Q5ST30 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
VARS2Q5ST30 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
VARS2Q5ST30 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms