Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 AC006427.1-201ENST00000514359 712 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 HMGN1P9-201ENST00000515212 298 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 RNA5SP43-201ENST00000516559 110 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 snoU109.6-201ENST00000516831 118 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 COX6B1P6-201ENST00000522347 255 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 HIGD1AP17-201ENST00000554576 276 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 MIR4284-201ENST00000578924 81 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 AC008814.1-201ENST00000603797 406 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 AP001521.2-201ENST00000608772 546 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 AL034370.1-201ENST00000397254 1590 ntBASIC5.25□□□□□ -1.57
SLC44A4Q53GD3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC046144.1-201ENST00000478559 1853 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 HMGB1P5-201ENST00000255320 642 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 RPL32P3-201ENST00000359025 275 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 RNU6-560P-201ENST00000364007 108 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 RNU6-304P-201ENST00000364855 107 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 RNU6-619P-201ENST00000365146 108 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AL356131.1-201ENST00000405826 414 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 RNU6-757P-201ENST00000410334 100 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 RNA5SP80-201ENST00000410475 111 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 SEPT2P1-201ENST00000419651 180 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 DPRXP1-201ENST00000426312 460 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC007559.1-201ENST00000428736 355 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 SEPT7P5-201ENST00000434048 306 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC243772.1-201ENST00000451620 410 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC011352.3-201ENST00000505162 593 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC116353.3-201ENST00000511215 249 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 RPS27AP18-201ENST00000515536 459 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 DUXAP1-201ENST00000556632 463 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 RPL26P30-202ENST00000602923 645 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AL390816.3-201ENST00000604527 1066 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 DPRXP5-201ENST00000604662 539 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC121247.2-201ENST00000604776 136 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AL391358.1-201ENST00000605342 190 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC069545.1-201ENST00000605671 358 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC018638.7-201ENST00000605836 1114 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 ECM1P2-201ENST00000503354 1577 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 Z95327.2-201ENST00000414579 1873 ntBASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A4Q53GD3 AC109315.1-201ENST00000584143 1347 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC092681.1-201ENST00000297369 291 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 MIR92A2-201ENST00000385299 75 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 ATP5F1P3-201ENST00000397213 657 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AL138880.1-201ENST00000405824 642 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 MIR1271-201ENST00000408537 86 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 RNA5SP113-201ENST00000410486 84 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AL161449.1-201ENST00000414531 1199 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC234782.4-201ENST00000417646 1048 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms