Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.83□□□□□ -1.64
SUMO3P55854 AC087276.1-201ENST00000529659 480 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 AC092851.1-201ENST00000535964 478 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.83□□□□□ -1.64
SUMO3P55854 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SUMO3P55854 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.83□□□□□ -1.64
SUMO3P55854 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.83□□□□□ -1.64
SUMO3P55854 AP001981.2-201ENST00000603241 418 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 BNIP3P11-201ENST00000603878 563 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 IMMP1LP3-201ENST00000604197 224 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 AC012557.2-201ENST00000605919 418 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.83□□□□□ -1.64
SUMO3P55854 AL158063.1-201ENST00000615349 536 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 AC093671.1-201ENST00000624981 2929 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 AC140134.1-201ENST00000511830 3544 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 SAGE4P-201ENST00000442271 3381 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 AP005435.3-201ENST00000531260 3198 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SUMO3P55854 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SUMO3P55854 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SUMO3P55854 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SUMO3P55854 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SUMO3P55854 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SUMO3P55854 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SUMO3P55854 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SUMO3P55854 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SUMO3P55854 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SUMO3P55854 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.82□□□□□ -1.64
SUMO3P55854 AL672167.1-206ENST00000356293 943 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.82□□□□□ -1.64
SUMO3P55854 OR1L6-202ENST00000373684 1044 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 SSXP10-201ENST00000402595 565 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 AL139128.1-201ENST00000413921 941 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.82□□□□□ -1.64
SUMO3P55854 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.82□□□□□ -1.64
SUMO3P55854 ZYG11AP1-201ENST00000430329 837 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.82□□□□□ -1.64
SUMO3P55854 AC010153.1-201ENST00000432862 727 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 GAPDHP58-201ENST00000438477 1006 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.82□□□□□ -1.64
SUMO3P55854 AC104634.1-201ENST00000452720 462 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 AC011225.1-201ENST00000457751 369 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 RPS15AP17-201ENST00000470598 390 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 HMGB1P21-201ENST00000502313 581 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 AC006427.1-201ENST00000514359 712 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.82□□□□□ -1.64
SUMO3P55854 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.82□□□□□ -1.64
SUMO3P55854 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.82□□□□□ -1.64
SUMO3P55854 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SUMO3P55854 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.82□□□□□ -1.64
SUMO3P55854 AC023161.2-201ENST00000551218 780 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.82□□□□□ -1.64
SUMO3P55854 RN7SL708P-201ENST00000580952 299 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SUMO3P55854 AL162431.4-201ENST00000604674 411 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 AC092354.1-201ENST00000606057 376 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.82□□□□□ -1.64
SUMO3P55854 AC090527.3-201ENST00000619041 548 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 MIR6839-201ENST00000620425 113 ntBASIC4.82□□□□□ -1.64
SUMO3P55854 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.82□□□□□ -1.64
SUMO3P55854 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.82□□□□□ -1.64
SUMO3P55854 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SUMO3P55854 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
SUMO3P55854 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SUMO3P55854 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
SUMO3P55854 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.82□□□□□ -1.64
SUMO3P55854 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.82□□□□□ -1.64
SUMO3P55854 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.82□□□□□ -1.64
SUMO3P55854 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SUMO3P55854 AL390237.1-201ENST00000404226 1415 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.81□□□□□ -1.64
SUMO3P55854 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SUMO3P55854 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.81□□□□□ -1.64
SUMO3P55854 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
SUMO3P55854 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SUMO3P55854 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SUMO3P55854 RNU6-623P-201ENST00000363143 105 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 RN7SKP162-201ENST00000363605 345 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SUMO3P55854 RNU6-723P-201ENST00000383973 107 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 MIR589-201ENST00000385238 99 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 OR8V1P-201ENST00000395193 873 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 OR8G2P-201ENST00000412796 908 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 AC073136.2-201ENST00000417282 849 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 SLC35E1P1-201ENST00000419313 864 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.81□□□□□ -1.64
SUMO3P55854 AC083875.1-201ENST00000419509 405 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 AC108075.1-201ENST00000424692 529 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 RPL7L1P9-201ENST00000431298 745 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.81□□□□□ -1.64
SUMO3P55854 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.81□□□□□ -1.64
SUMO3P55854 TAF9P1-201ENST00000445421 515 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 AL360221.1-201ENST00000445989 335 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 HMGB3P21-201ENST00000452483 547 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms