Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CDH4P55283 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH4P55283 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CDH4P55283 AL592437.2-201ENST00000421655 2434 ntBASIC4.15□□□□□ -1.74
CDH4P55283 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.15□□□□□ -1.74
CDH4P55283 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH4P55283 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.15□□□□□ -1.74
CDH4P55283 AC011266.1-201ENST00000624119 3569 ntBASIC4.15□□□□□ -1.74
CDH4P55283 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CDH4P55283 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CDH4P55283 IQCB2P-201ENST00000401788 1633 ntBASIC4.15□□□□□ -1.74
CDH4P55283 MARK2P15-201ENST00000432204 2186 ntBASIC4.15□□□□□ -1.75
CDH4P55283 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH4P55283 RNU6-628P-201ENST00000410675 107 ntBASIC4.15□□□□□ -1.75
CDH4P55283 RAC1P3-201ENST00000416129 580 ntBASIC4.15□□□□□ -1.75
CDH4P55283 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CDH4P55283 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.15□□□□□ -1.75
CDH4P55283 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH4P55283 RPL21P89-201ENST00000444021 467 ntBASIC4.15□□□□□ -1.75
CDH4P55283 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH4P55283 AL161747.1-201ENST00000480068 358 ntBASIC4.15□□□□□ -1.75
CDH4P55283 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH4P55283 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH4P55283 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDH4P55283 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH4P55283 AC091516.1-201ENST00000549191 703 ntBASIC4.15□□□□□ -1.75
CDH4P55283 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH4P55283 AL049870.4-201ENST00000555741 486 ntBASIC4.15□□□□□ -1.75
CDH4P55283 AC007599.1-201ENST00000568688 1174 ntBASIC4.15□□□□□ -1.75
CDH4P55283 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH4P55283 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH4P55283 MIR4512-201ENST00000583257 77 ntBASIC4.15□□□□□ -1.75
CDH4P55283 AL133247.2-201ENST00000603236 482 ntBASIC4.15□□□□□ -1.75
CDH4P55283 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CDH4P55283 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH4P55283 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH4P55283 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH4P55283 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH4P55283 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
CDH4P55283 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH4P55283 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH4P55283 RNA5SP515-201ENST00000364570 118 ntBASIC4.14□□□□□ -1.75
CDH4P55283 SNORA62.2-201ENST00000364672 152 ntBASIC4.14□□□□□ -1.75
CDH4P55283 RNA5SP283-201ENST00000365604 119 ntBASIC4.14□□□□□ -1.75
CDH4P55283 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH4P55283 HMGB3P19-201ENST00000403971 560 ntBASIC4.14□□□□□ -1.75
CDH4P55283 RNU4-6P-201ENST00000410804 122 ntBASIC4.14□□□□□ -1.75
CDH4P55283 AL691449.1-201ENST00000426570 421 ntBASIC4.14□□□□□ -1.75
CDH4P55283 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH4P55283 MTCO1P52-201ENST00000433928 531 ntBASIC4.14□□□□□ -1.75
CDH4P55283 GSTA7P-201ENST00000438425 448 ntBASIC4.14□□□□□ -1.75
CDH4P55283 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH4P55283 AC104306.1-201ENST00000449702 371 ntBASIC4.14□□□□□ -1.75
CDH4P55283 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH4P55283 RPL7P31-201ENST00000450192 724 ntBASIC4.14□□□□□ -1.75
CDH4P55283 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH4P55283 AC107398.1-201ENST00000486904 505 ntBASIC4.14□□□□□ -1.75
CDH4P55283 AC110792.1-201ENST00000491826 472 ntBASIC4.14□□□□□ -1.75
CDH4P55283 TPT1P3-201ENST00000492841 512 ntBASIC4.14□□□□□ -1.75
CDH4P55283 RNU6-889P-201ENST00000517189 103 ntBASIC4.14□□□□□ -1.75
CDH4P55283 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH4P55283 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH4P55283 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH4P55283 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH4P55283 AGGF1P6-201ENST00000569213 976 ntBASIC4.14□□□□□ -1.75
CDH4P55283 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH4P55283 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.14□□□□□ -1.75
CDH4P55283 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH4P55283 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH4P55283 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDH4P55283 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH4P55283 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH4P55283 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH4P55283 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH4P55283 AL118496.1-201ENST00000440201 1812 ntBASIC4.14□□□□□ -1.75
CDH4P55283 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CDH4P55283 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH4P55283 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH4P55283 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH4P55283 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH4P55283 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CDH4P55283 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH4P55283 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.13□□□□□ -1.75
CDH4P55283 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDH4P55283 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH4P55283 RNA5SP479-201ENST00000364858 117 ntBASIC4.13□□□□□ -1.75
CDH4P55283 RNU6-317P-201ENST00000384031 107 ntBASIC4.13□□□□□ -1.75
CDH4P55283 AL356967.1-201ENST00000406305 431 ntBASIC4.13□□□□□ -1.75
CDH4P55283 MIR1193-201ENST00000408109 78 ntBASIC4.13□□□□□ -1.75
CDH4P55283 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.13□□□□□ -1.75
CDH4P55283 OR8F1P-201ENST00000425243 930 ntBASIC4.13□□□□□ -1.75
CDH4P55283 AL445528.1-201ENST00000426330 420 ntBASIC4.13□□□□□ -1.75
CDH4P55283 AL160175.1-201ENST00000428124 247 ntBASIC4.13□□□□□ -1.75
CDH4P55283 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.13□□□□□ -1.75
CDH4P55283 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDH4P55283 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH4P55283 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.13□□□□□ -1.75
CDH4P55283 FABP3P2-201ENST00000453169 399 ntBASIC4.13□□□□□ -1.75
CDH4P55283 SUMO1P1-201ENST00000497904 306 ntBASIC4.13□□□□□ -1.75
CDH4P55283 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms