Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.37□□□□□ -1.71
ACLYP53396 RN7SL293P-201ENST00000481765 281 ntBASIC4.37□□□□□ -1.71
ACLYP53396 AC104619.4-201ENST00000510773 249 ntBASIC4.37□□□□□ -1.71
ACLYP53396 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.37□□□□□ -1.71
ACLYP53396 AC117525.1-201ENST00000515228 503 ntBASIC4.37□□□□□ -1.71
ACLYP53396 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.37□□□□□ -1.71
ACLYP53396 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ACLYP53396 MIR3922-201ENST00000585192 84 ntBASIC4.37□□□□□ -1.71
ACLYP53396 AC092354.2-201ENST00000607786 514 ntBASIC4.37□□□□□ -1.71
ACLYP53396 AC064801.1-201ENST00000612025 407 ntBASIC4.37□□□□□ -1.71
ACLYP53396 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.37□□□□□ -1.71
ACLYP53396 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
ACLYP53396 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ACLYP53396 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
ACLYP53396 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
ACLYP53396 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ACLYP53396 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
ACLYP53396 AC010329.2-201ENST00000595195 2737 ntBASIC4.37□□□□□ -1.71
ACLYP53396 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ACLYP53396 MTCO1P12-201ENST00000414273 1543 ntBASIC4.36□□□□□ -1.71
ACLYP53396 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
ACLYP53396 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ACLYP53396 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
ACLYP53396 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
ACLYP53396 HSPD1P11-201ENST00000508643 1702 ntBASIC4.36□□□□□ -1.71
ACLYP53396 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ACLYP53396 HDGFP1-201ENST00000405943 252 ntBASIC4.36□□□□□ -1.71
ACLYP53396 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.36□□□□□ -1.71
ACLYP53396 AL139247.1-201ENST00000422768 325 ntBASIC4.36□□□□□ -1.71
ACLYP53396 AP000907.1-201ENST00000428428 510 ntBASIC4.36□□□□□ -1.71
ACLYP53396 MTND6P18-201ENST00000439477 513 ntBASIC4.36□□□□□ -1.71
ACLYP53396 RPL7L1P1-201ENST00000448259 785 ntBASIC4.36□□□□□ -1.71
ACLYP53396 RPL21P11-201ENST00000461458 483 ntBASIC4.36□□□□□ -1.71
ACLYP53396 AC106707.2-201ENST00000484182 374 ntBASIC4.36□□□□□ -1.71
ACLYP53396 AC026427.2-201ENST00000506228 536 ntBASIC4.36□□□□□ -1.71
ACLYP53396 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.36□□□□□ -1.71
ACLYP53396 HMGN1P15-201ENST00000513870 295 ntBASIC4.36□□□□□ -1.71
ACLYP53396 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.36□□□□□ -1.71
ACLYP53396 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.36□□□□□ -1.71
ACLYP53396 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.36□□□□□ -1.71
ACLYP53396 AC093014.1-201ENST00000548926 724 ntBASIC4.36□□□□□ -1.71
ACLYP53396 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.36□□□□□ -1.71
ACLYP53396 AL121834.1-201ENST00000572284 509 ntBASIC4.36□□□□□ -1.71
ACLYP53396 AF131215.7-201ENST00000602443 707 ntBASIC4.36□□□□□ -1.71
ACLYP53396 AC107905.1-201ENST00000616204 426 ntBASIC4.36□□□□□ -1.71
ACLYP53396 AC009237.17-201ENST00000618111 748 ntBASIC4.36□□□□□ -1.71
ACLYP53396 AC138907.10-201ENST00000623708 983 ntBASIC4.36□□□□□ -1.71
ACLYP53396 AC055839.1-201ENST00000634467 498 ntBASIC4.36□□□□□ -1.71
ACLYP53396 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ACLYP53396 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ACLYP53396 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ACLYP53396 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
ACLYP53396 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
ACLYP53396 AC087190.4-201ENST00000574616 8334 ntBASIC4.36□□□□□ -1.71
ACLYP53396 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ACLYP53396 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.36□□□□□ -1.71
ACLYP53396 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
ACLYP53396 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ACLYP53396 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ACLYP53396 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ACLYP53396 AC092079.1-201ENST00000558620 1985 ntBASIC4.35□□□□□ -1.71
ACLYP53396 RNU1-15P-201ENST00000353977 144 ntBASIC4.35□□□□□ -1.71
ACLYP53396 RN7SKP247-201ENST00000411094 308 ntBASIC4.35□□□□□ -1.71
ACLYP53396 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.35□□□□□ -1.71
ACLYP53396 RPS23P10-201ENST00000416185 486 ntBASIC4.35□□□□□ -1.71
ACLYP53396 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.35□□□□□ -1.71
ACLYP53396 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.35□□□□□ -1.71
ACLYP53396 RPS26P47-201ENST00000427219 348 ntBASIC4.35□□□□□ -1.71
ACLYP53396 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.35□□□□□ -1.71
ACLYP53396 PRELID3BP10-201ENST00000431957 584 ntBASIC4.35□□□□□ -1.71
ACLYP53396 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.35□□□□□ -1.71
ACLYP53396 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.35□□□□□ -1.71
ACLYP53396 CLIC4P1-201ENST00000453177 535 ntBASIC4.35□□□□□ -1.71
ACLYP53396 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.35□□□□□ -1.71
ACLYP53396 AL354710.1-201ENST00000453641 246 ntBASIC4.35□□□□□ -1.71
ACLYP53396 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.35□□□□□ -1.71
ACLYP53396 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.35□□□□□ -1.71
ACLYP53396 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.35□□□□□ -1.71
ACLYP53396 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.35□□□□□ -1.71
ACLYP53396 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.35□□□□□ -1.71
ACLYP53396 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.35□□□□□ -1.71
ACLYP53396 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.35□□□□□ -1.71
ACLYP53396 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.35□□□□□ -1.71
ACLYP53396 BMS1P7-201ENST00000602440 1052 ntBASIC4.35□□□□□ -1.71
ACLYP53396 AC026979.4-201ENST00000606555 645 ntBASIC4.35□□□□□ -1.71
ACLYP53396 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
ACLYP53396 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.35□□□□□ -1.71
ACLYP53396 AL139089.1-201ENST00000620372 975 ntBASIC4.35□□□□□ -1.71
ACLYP53396 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
ACLYP53396 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.35□□□□□ -1.71
ACLYP53396 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACLYP53396 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
ACLYP53396 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACLYP53396 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.34□□□□□ -1.71
ACLYP53396 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ACLYP53396 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACLYP53396 RNU6-891P-201ENST00000384280 111 ntBASIC4.34□□□□□ -1.71
ACLYP53396 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ACLYP53396 AL512430.2-201ENST00000406786 339 ntBASIC4.34□□□□□ -1.71
ACLYP53396 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms