Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NKX2-5P52952 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NKX2-5P52952 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-5P52952 SNORD35B-201ENST00000363660 87 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 SNORA70E-201ENST00000384492 135 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 MIR223-201ENST00000385204 110 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.32□□□□□ -1.88
NKX2-5P52952 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-5P52952 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.32□□□□□ -1.88
NKX2-5P52952 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX2-5P52952 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-5P52952 AC239367.2-201ENST00000447309 705 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 RPS17P13-201ENST00000448974 407 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-5P52952 PTGES3P5-201ENST00000455109 434 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-5P52952 RPS27P29-201ENST00000463110 252 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 RPL37P6-202ENST00000464216 403 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 AC146507.1-201ENST00000468335 354 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 AC090114.3-201ENST00000479267 829 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-5P52952 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-5P52952 AC104109.1-201ENST00000498563 436 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX2-5P52952 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX2-5P52952 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-5P52952 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX2-5P52952 AL110118.1-201ENST00000553543 400 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX2-5P52952 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.32□□□□□ -1.88
NKX2-5P52952 AC008507.1-201ENST00000587506 734 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 AC115085.1-201ENST00000588924 229 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 AC090525.3-201ENST00000605601 189 ntBASIC3.32□□□□□ -1.88
NKX2-5P52952 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-5P52952 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NKX2-5P52952 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-5P52952 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 AC087565.3-202ENST00000642085 1603 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 MIR30E-201ENST00000362104 92 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 MIR3065-201ENST00000390137 79 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NKX2-5P52952 RNU6-244P-201ENST00000391028 104 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 U3.25-201ENST00000391209 220 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 SDHCP2-201ENST00000398565 501 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 AP000534.2-201ENST00000412729 568 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 AC023347.2-201ENST00000433994 462 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-5P52952 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.31□□□□□ -1.88
NKX2-5P52952 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 RPL36AP13-201ENST00000457490 317 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NKX2-5P52952 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX2-5P52952 RN7SL30P-201ENST00000488416 306 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.31□□□□□ -1.88
NKX2-5P52952 HIGD1AP14-201ENST00000507617 282 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 AC093824.1-201ENST00000508796 343 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 CCNHP1-201ENST00000513311 678 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 RN7SKP66-201ENST00000516681 231 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX2-5P52952 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-5P52952 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-5P52952 CENPUP2-201ENST00000555897 1186 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 AC090877.1-201ENST00000561418 344 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-5P52952 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.31□□□□□ -1.88
NKX2-5P52952 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 AC079587.1-201ENST00000603846 277 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 AC069304.3-201ENST00000603938 1084 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 SNORA51-201ENST00000606420 132 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 AC005021.1-201ENST00000608730 355 ntBASIC3.31□□□□□ -1.88
NKX2-5P52952 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.31□□□□□ -1.88
NKX2-5P52952 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX2-5P52952 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-5P52952 MTND5P3-201ENST00000438536 1800 ntBASIC3.3□□□□□ -1.88
NKX2-5P52952 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
NKX2-5P52952 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.3□□□□□ -1.88
NKX2-5P52952 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.3□□□□□ -1.88
NKX2-5P52952 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NKX2-5P52952 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
NKX2-5P52952 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
NKX2-5P52952 MIR591-201ENST00000385290 95 ntBASIC3.3□□□□□ -1.88
NKX2-5P52952 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.3□□□□□ -1.88
NKX2-5P52952 RNU6-55P-201ENST00000411092 107 ntBASIC3.3□□□□□ -1.88
NKX2-5P52952 RNU6-954P-201ENST00000411355 107 ntBASIC3.3□□□□□ -1.88
NKX2-5P52952 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NKX2-5P52952 RPL23AP69-201ENST00000431134 458 ntBASIC3.3□□□□□ -1.88
NKX2-5P52952 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.3□□□□□ -1.88
NKX2-5P52952 YWHAZP2-201ENST00000440317 728 ntBASIC3.3□□□□□ -1.88
NKX2-5P52952 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms