Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AC093063.1-201ENST00000599317 363 ntBASIC8.79□□□□□ -1
HOXD11P31277 AL451054.3-201ENST00000611115 776 ntBASIC8.79□□□□□ -1
HOXD11P31277 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC8.79□□□□□ -1
HOXD11P31277 CARMN-212ENST00000614896 536 ntTSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 HBG1-202ENST00000632727 369 ntTSL 3 BASIC8.79□□□□□ -1
HOXD11P31277 MIR3202-2-201ENST00000635980 79 ntBASIC8.79□□□□□ -1
HOXD11P31277 AC073869.8-201ENST00000641806 335 ntBASIC8.79□□□□□ -1
HOXD11P31277 AC006946.2-201ENST00000608373 2855 ntBASIC8.79□□□□□ -1
HOXD11P31277 S100A7A-203ENST00000368729 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 ZNF774-202ENST00000379090 5613 ntTSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.79□□□□□ -1
HOXD11P31277 ABI1-201ENST00000346832 3289 ntTSL 2 BASIC8.79□□□□□ -1
HOXD11P31277 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 SGK1-201ENST00000237305 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 AC133552.3-201ENST00000572236 1869 ntBASIC8.79□□□□□ -1
HOXD11P31277 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
HOXD11P31277 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
HOXD11P31277 MAPK10-310ENST00000641384 2213 ntBASIC8.78□□□□□ -1
HOXD11P31277 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HOXD11P31277 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC8.78□□□□□ -1
HOXD11P31277 AOX2P-204ENST00000487742 3284 ntBASIC8.78□□□□□ -1
HOXD11P31277 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HOXD11P31277 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.78□□□□□ -1
HOXD11P31277 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC8.78□□□□□ -1
HOXD11P31277 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8.78□□□□□ -1
HOXD11P31277 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.78□□□□□ -1
HOXD11P31277 SNORD3G-201ENST00000362796 215 ntBASIC8.78□□□□□ -1
HOXD11P31277 RNU1-34P-201ENST00000364421 157 ntBASIC8.78□□□□□ -1
HOXD11P31277 AL355497.1-201ENST00000406262 551 ntBASIC8.78□□□□□ -1
HOXD11P31277 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC8.78□□□□□ -1
HOXD11P31277 AC246785.1-201ENST00000440916 264 ntBASIC8.78□□□□□ -1
HOXD11P31277 RPS11P7-201ENST00000442125 465 ntBASIC8.78□□□□□ -1
HOXD11P31277 AL589765.3-201ENST00000446084 462 ntBASIC8.78□□□□□ -1
HOXD11P31277 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC8.78□□□□□ -1
HOXD11P31277 HMGB3P8-201ENST00000449709 577 ntBASIC8.78□□□□□ -1
HOXD11P31277 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC8.78□□□□□ -1
HOXD11P31277 RN7SL419P-201ENST00000471592 287 ntBASIC8.78□□□□□ -1
HOXD11P31277 RN7SL282P-201ENST00000479676 297 ntBASIC8.78□□□□□ -1
HOXD11P31277 RPS4XP1-201ENST00000482189 787 ntBASIC8.78□□□□□ -1
HOXD11P31277 RNU6-927P-201ENST00000516199 100 ntBASIC8.78□□□□□ -1
HOXD11P31277 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC8.78□□□□□ -1
HOXD11P31277 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC8.78□□□□□ -1
HOXD11P31277 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC8.78□□□□□ -1
HOXD11P31277 TDRD1-203ENST00000369282 3705 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
HOXD11P31277 KCNE1-204ENST00000399289 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HOXD11P31277 P2RX7-202ENST00000328963 5161 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HOXD11P31277 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.78□□□□□ -1
HOXD11P31277 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HOXD11P31277 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HOXD11P31277 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC8.78□□□□□ -1
HOXD11P31277 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.77□□□□□ -1
HOXD11P31277 LARP4-204ENST00000429001 4000 ntTSL 5 BASIC8.77□□□□□ -1
HOXD11P31277 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC8.77□□□□□ -1
HOXD11P31277 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.77□□□□□ -1
HOXD11P31277 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1
HOXD11P31277 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
HOXD11P31277 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC8.77□□□□□ -1.01
HOXD11P31277 AMER1-201ENST00000330258 8443 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
HOXD11P31277 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC8.77□□□□□ -1.01
HOXD11P31277 AC018529.3-201ENST00000624212 2254 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 LYPD4-203ENST00000609812 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
HOXD11P31277 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 RNA5SP302-201ENST00000364896 100 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 U8.10-201ENST00000384260 133 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 RNU1-8P-201ENST00000384328 165 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 SNORA14B-201ENST00000384452 135 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 AC023141.10-201ENST00000415634 200 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC8.77□□□□□ -1.01
HOXD11P31277 AC018638.3-201ENST00000461273 132 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 RN7SL272P-201ENST00000487762 289 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 AC034207.1-201ENST00000506742 948 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 MRPS36P2-201ENST00000512569 299 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 IGKV1D-32-201ENST00000517449 318 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 AC025647.1-201ENST00000517879 253 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 AC027237.2-201ENST00000558702 391 ntTSL 3 BASIC8.77□□□□□ -1.01
HOXD11P31277 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.77□□□□□ -1.01
HOXD11P31277 MIR5688-201ENST00000580619 83 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 AC120024.3-201ENST00000603167 156 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 AC111186.1-201ENST00000604684 130 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 AC015813.4-201ENST00000610469 179 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 MIR6798-201ENST00000612887 67 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 AC009831.4-201ENST00000620744 325 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 uc_338.21-201ENST00000622458 147 ntBASIC8.77□□□□□ -1.01
HOXD11P31277 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
HOXD11P31277 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 256.4 ms