Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAB5AP20339 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAB5AP20339 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAB5AP20339 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RAB5AP20339 UBE3AP2-201ENST00000429033 2259 ntBASIC3.22□□□□□ -1.89
RAB5AP20339 CEP170P1-201ENST00000502249 4587 ntBASIC3.22□□□□□ -1.89
RAB5AP20339 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RAB5AP20339 NCLP2-201ENST00000416078 1462 ntBASIC3.22□□□□□ -1.89
RAB5AP20339 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RAB5AP20339 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
RAB5AP20339 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.21□□□□□ -1.89
RAB5AP20339 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.21□□□□□ -1.89
RAB5AP20339 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
RAB5AP20339 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
RAB5AP20339 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RAB5AP20339 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RAB5AP20339 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAB5AP20339 XPOTP1-201ENST00000443317 2398 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RAB5AP20339 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAB5AP20339 RN7SKP187-201ENST00000365536 330 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 EI24P2-201ENST00000397776 1076 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 OR1F12-201ENST00000402365 945 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 VN1R12P-201ENST00000403778 876 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB5AP20339 RNA5SP178-201ENST00000410380 128 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 RN7SKP106-201ENST00000410832 272 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 RPL37P18-201ENST00000411602 243 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB5AP20339 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB5AP20339 OR51AB1P-201ENST00000429046 620 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 AL121776.1-201ENST00000429337 372 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.21□□□□□ -1.9
RAB5AP20339 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RAB5AP20339 RPL23AP33-201ENST00000442301 452 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 RPS29P31-201ENST00000446147 164 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 AC068135.1-201ENST00000446164 246 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 MRPL35P4-201ENST00000453682 566 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.21□□□□□ -1.9
RAB5AP20339 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.21□□□□□ -1.9
RAB5AP20339 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.21□□□□□ -1.9
RAB5AP20339 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 AC084754.1-201ENST00000463466 464 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 RN7SL168P-201ENST00000463821 279 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 AC104763.1-201ENST00000475274 360 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RAB5AP20339 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB5AP20339 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB5AP20339 ARL2BPP6-201ENST00000512757 439 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 AC093755.1-201ENST00000512950 1023 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 RN7SKP60-201ENST00000516985 239 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB5AP20339 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB5AP20339 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
RAB5AP20339 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.21□□□□□ -1.9
RAB5AP20339 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.21□□□□□ -1.9
RAB5AP20339 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.21□□□□□ -1.9
RAB5AP20339 AC093014.1-201ENST00000548926 724 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC3.21□□□□□ -1.9
RAB5AP20339 AC063950.1-201ENST00000552036 308 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 AC004825.1-201ENST00000555068 586 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.21□□□□□ -1.9
RAB5AP20339 MIR4425-201ENST00000580572 84 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
RAB5AP20339 AC020910.3-201ENST00000603701 874 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 AP000864.1-201ENST00000609424 650 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 MIR6889-201ENST00000613185 59 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.21□□□□□ -1.9
RAB5AP20339 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAB5AP20339 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.21□□□□□ -1.9
RAB5AP20339 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAB5AP20339 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RAB5AP20339 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAB5AP20339 MTND5P3-201ENST00000438536 1800 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAB5AP20339 ZNF826P-207ENST00000622273 1910 ntBASIC3.21□□□□□ -1.9
RAB5AP20339 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAB5AP20339 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAB5AP20339 AC104446.1-201ENST00000613728 1321 ntBASIC3.2□□□□□ -1.9
RAB5AP20339 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RAB5AP20339 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAB5AP20339 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB5AP20339 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAB5AP20339 OR5T3-201ENST00000303059 1023 ntBASIC3.2□□□□□ -1.9
RAB5AP20339 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RAB5AP20339 RNA5SP183-201ENST00000362452 119 ntBASIC3.2□□□□□ -1.9
RAB5AP20339 RNU6-543P-201ENST00000362576 108 ntBASIC3.2□□□□□ -1.9
RAB5AP20339 OR52E6-202ENST00000379946 954 ntBASIC3.2□□□□□ -1.9
RAB5AP20339 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAB5AP20339 RNU4-34P-201ENST00000410431 124 ntBASIC3.2□□□□□ -1.9
RAB5AP20339 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.2□□□□□ -1.9
RAB5AP20339 PTP4A1P5-201ENST00000420305 455 ntBASIC3.2□□□□□ -1.9
RAB5AP20339 RPL21P109-201ENST00000422213 475 ntBASIC3.2□□□□□ -1.9
RAB5AP20339 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
RAB5AP20339 RPS12P10-201ENST00000427031 377 ntBASIC3.2□□□□□ -1.9
RAB5AP20339 PSMA2P3-201ENST00000429685 675 ntBASIC3.2□□□□□ -1.9
RAB5AP20339 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB5AP20339 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB5AP20339 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB5AP20339 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms