Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 Y_RNA.111-201ENST00000363248 100 ntBASIC6.24□□□□□ -1.41
TOP2AP11388 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.24□□□□□ -1.41
TOP2AP11388 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.24□□□□□ -1.41
TOP2AP11388 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.24□□□□□ -1.41
TOP2AP11388 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TOP2AP11388 SAGE2P-201ENST00000420011 2126 ntBASIC6.24□□□□□ -1.41
TOP2AP11388 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.24□□□□□ -1.41
TOP2AP11388 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TOP2AP11388 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
TOP2AP11388 AL442128.2-201ENST00000620246 1824 ntBASIC6.23□□□□□ -1.41
TOP2AP11388 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.23□□□□□ -1.41
TOP2AP11388 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
TOP2AP11388 RNA5SP197-201ENST00000363357 119 ntBASIC6.23□□□□□ -1.41
TOP2AP11388 SNORA48.5-201ENST00000391143 135 ntBASIC6.23□□□□□ -1.41
TOP2AP11388 U3.39-201ENST00000408569 239 ntBASIC6.23□□□□□ -1.41
TOP2AP11388 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TOP2AP11388 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC6.22□□□□□ -1.41
TOP2AP11388 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TOP2AP11388 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.22□□□□□ -1.41
TOP2AP11388 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TOP2AP11388 MTHFD2P2-201ENST00000407725 247 ntBASIC6.22□□□□□ -1.41
TOP2AP11388 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.22□□□□□ -1.41
TOP2AP11388 AC006994.1-201ENST00000438212 839 ntBASIC6.22□□□□□ -1.41
TOP2AP11388 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.22□□□□□ -1.41
TOP2AP11388 HMGB3P13-201ENST00000511263 607 ntBASIC6.22□□□□□ -1.41
TOP2AP11388 RN7SKP209-201ENST00000516888 304 ntBASIC6.22□□□□□ -1.41
TOP2AP11388 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.22□□□□□ -1.41
TOP2AP11388 AP006245.1-201ENST00000522549 120 ntBASIC6.22□□□□□ -1.41
TOP2AP11388 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.22□□□□□ -1.41
TOP2AP11388 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.22□□□□□ -1.41
TOP2AP11388 CR392039.4-201ENST00000624968 501 ntBASIC6.22□□□□□ -1.41
TOP2AP11388 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.22□□□□□ -1.41
TOP2AP11388 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TOP2AP11388 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
TOP2AP11388 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TOP2AP11388 AC120036.2-201ENST00000509729 1474 ntBASIC6.22□□□□□ -1.41
TOP2AP11388 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TOP2AP11388 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TOP2AP11388 AL357075.1-201ENST00000404107 726 ntBASIC6.21□□□□□ -1.42
TOP2AP11388 AL606834.2-201ENST00000602954 668 ntBASIC6.21□□□□□ -1.42
TOP2AP11388 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.21□□□□□ -1.42
TOP2AP11388 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.21□□□□□ -1.42
TOP2AP11388 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
TOP2AP11388 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TOP2AP11388 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC6.21□□□□□ -1.42
TOP2AP11388 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.21□□□□□ -1.42
TOP2AP11388 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TOP2AP11388 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TOP2AP11388 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
TOP2AP11388 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TOP2AP11388 FRG1CP-201ENST00000358464 769 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 RN7SKP199-201ENST00000410325 305 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 BX323014.1-201ENST00000412876 237 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 LIPT1P1-201ENST00000415870 1186 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 MOB1AP1-201ENST00000430903 535 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 AC006445.1-201ENST00000491925 405 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.2□□□□□ -1.42
TOP2AP11388 MIR4276-201ENST00000584832 70 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 CKS1BP3-201ENST00000600888 237 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 BNIP3P41-202ENST00000616656 861 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TOP2AP11388 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TOP2AP11388 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
TOP2AP11388 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TOP2AP11388 AC092435.4-201ENST00000623012 4159 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TOP2AP11388 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TOP2AP11388 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
TOP2AP11388 AC092809.1-201ENST00000441469 474 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.2□□□□□ -1.42
TOP2AP11388 RPL37P3-201ENST00000456825 293 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 AL136126.1-201ENST00000473603 402 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.2□□□□□ -1.42
TOP2AP11388 PTGES3P3-201ENST00000511479 482 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.2□□□□□ -1.42
TOP2AP11388 AC124312.4-201ENST00000605533 310 ntBASIC6.2□□□□□ -1.42
TOP2AP11388 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.2□□□□□ -1.42
TOP2AP11388 TCP1P3-201ENST00000414406 1498 ntBASIC6.19□□□□□ -1.42
TOP2AP11388 AP000542.2-201ENST00000623199 6179 ntBASIC6.19□□□□□ -1.42
TOP2AP11388 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
TOP2AP11388 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TOP2AP11388 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TOP2AP11388 ATP5HP2-201ENST00000433885 485 ntBASIC6.19□□□□□ -1.42
TOP2AP11388 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.19□□□□□ -1.42
TOP2AP11388 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.19□□□□□ -1.42
TOP2AP11388 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.19□□□□□ -1.42
TOP2AP11388 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC6.19□□□□□ -1.42
TOP2AP11388 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.19□□□□□ -1.42
TOP2AP11388 MIR5680-201ENST00000577577 84 ntBASIC6.19□□□□□ -1.42
TOP2AP11388 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.19□□□□□ -1.42
TOP2AP11388 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TOP2AP11388 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TOP2AP11388 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TOP2AP11388 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.18□□□□□ -1.42
TOP2AP11388 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC6.18□□□□□ -1.42
TOP2AP11388 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TOP2AP11388 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TOP2AP11388 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms