Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFBP01127 MIR6500-201ENST00000622700 86 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFBP01127 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFBP01127 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFBP01127 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFBP01127 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.39□□□□□ -1.71
PDGFBP01127 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PDGFBP01127 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFBP01127 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFBP01127 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFBP01127 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFBP01127 AL049737.1-201ENST00000413920 1403 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 AL133243.3-201ENST00000617415 3004 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PDGFBP01127 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFBP01127 AP000542.2-201ENST00000623199 6179 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFBP01127 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.38□□□□□ -1.71
PDGFBP01127 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFBP01127 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PDGFBP01127 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFBP01127 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.38□□□□□ -1.71
PDGFBP01127 RN7SKP182-201ENST00000410772 298 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFBP01127 RPS20P14-201ENST00000412545 360 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 RWDD4P2-201ENST00000426392 563 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 RPL17P35-201ENST00000432217 549 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFBP01127 AL513321.1-201ENST00000441175 761 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 NOTCH2P1-201ENST00000443481 624 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFBP01127 AC104978.1-201ENST00000449387 391 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 RWDD4P1-201ENST00000488019 565 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 RPL30P11-201ENST00000495304 339 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 MYL12BP2-201ENST00000503948 512 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 AC026427.2-201ENST00000506228 536 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.38□□□□□ -1.71
PDGFBP01127 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.38□□□□□ -1.71
PDGFBP01127 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.38□□□□□ -1.71
PDGFBP01127 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.38□□□□□ -1.71
PDGFBP01127 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.38□□□□□ -1.71
PDGFBP01127 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
PDGFBP01127 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.38□□□□□ -1.71
PDGFBP01127 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFBP01127 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFBP01127 AL645927.2-201ENST00000618350 349 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 MIR6715B-201ENST00000637172 77 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFBP01127 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFBP01127 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PDGFBP01127 AC090229.1-201ENST00000590983 1609 ntBASIC4.38□□□□□ -1.71
PDGFBP01127 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PDGFBP01127 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFBP01127 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PDGFBP01127 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFBP01127 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFBP01127 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFBP01127 AC024560.2-201ENST00000507981 1497 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.37□□□□□ -1.71
PDGFBP01127 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFBP01127 AL731532.2-201ENST00000623542 1953 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFBP01127 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFBP01127 Y_RNA.111-201ENST00000363248 100 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFBP01127 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PDGFBP01127 RNU4-6P-201ENST00000410804 122 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 AL450992.3-201ENST00000413192 568 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 TATDN1P1-201ENST00000414123 891 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 XKRYP4-201ENST00000414395 483 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFBP01127 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFBP01127 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.37□□□□□ -1.71
PDGFBP01127 PTP4A1P3-201ENST00000433661 420 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 UBE2V1P3-201ENST00000439651 417 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 TPTE2P6-202ENST00000445572 1007 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFBP01127 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFBP01127 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PDGFBP01127 XKRYP5-201ENST00000449659 483 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFBP01127 RNA5SP103-201ENST00000459503 118 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.37□□□□□ -1.71
PDGFBP01127 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.37□□□□□ -1.71
PDGFBP01127 FTH1P24-201ENST00000503502 462 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 RNA5SP497-201ENST00000516081 97 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFBP01127 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFBP01127 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.37□□□□□ -1.71
PDGFBP01127 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFBP01127 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFBP01127 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFBP01127 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFBP01127 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFBP01127 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.37□□□□□ -1.71
PDGFBP01127 HMGB2P1-201ENST00000591146 634 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 BPIFA4P-203ENST00000603168 689 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 AC135178.6-201ENST00000605314 398 ntBASIC4.37□□□□□ -1.71
PDGFBP01127 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms