Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC092954.1-201ENST00000609121 445 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AL445423.1-201ENST00000609941 536 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AC097478.2-201ENST00000610572 514 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AC012409.3-201ENST00000611343 981 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AP002782.1-201ENST00000623107 614 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AP002967.1-201ENST00000624203 539 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AC006065.6-201ENST00000625201 545 ntBASIC4.19□□□□□ -1.74
PRKNO60260 ZNF663P-202ENST00000641770 1131 ntBASIC4.19□□□□□ -1.74
PRKNO60260 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKNO60260 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.19□□□□□ -1.74
PRKNO60260 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKNO60260 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKNO60260 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PRKNO60260 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PRKNO60260 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKNO60260 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.19□□□□□ -1.74
PRKNO60260 AC025031.4-201ENST00000621248 3271 ntBASIC4.19□□□□□ -1.74
PRKNO60260 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.18□□□□□ -1.74
PRKNO60260 CPHL1P-201ENST00000461341 3407 ntBASIC4.18□□□□□ -1.74
PRKNO60260 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 AC100871.1-201ENST00000507871 1456 ntBASIC4.18□□□□□ -1.74
PRKNO60260 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.18□□□□□ -1.74
PRKNO60260 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PRKNO60260 AC005261.4-201ENST00000600047 1385 ntBASIC4.18□□□□□ -1.74
PRKNO60260 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKNO60260 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKNO60260 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKNO60260 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKNO60260 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKNO60260 RNU1-130P-201ENST00000363930 160 ntBASIC4.18□□□□□ -1.74
PRKNO60260 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKNO60260 MIR525-201ENST00000384978 85 ntBASIC4.18□□□□□ -1.74
PRKNO60260 MIR1303-201ENST00000408625 86 ntBASIC4.18□□□□□ -1.74
PRKNO60260 TMSB10P2-201ENST00000416049 131 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 HMGB1P49-201ENST00000418882 569 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKNO60260 RPL18P10-201ENST00000425606 538 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AC234064.1-201ENST00000436312 247 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.18□□□□□ -1.74
PRKNO60260 AL035551.1-201ENST00000446931 348 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AC022431.1-201ENST00000450941 438 ntBASIC4.18□□□□□ -1.74
PRKNO60260 NPM1P13-201ENST00000452663 865 ntBASIC4.18□□□□□ -1.74
PRKNO60260 USP9YP25-201ENST00000457708 443 ntBASIC4.18□□□□□ -1.74
PRKNO60260 RPS27AP17-201ENST00000463344 455 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AC091959.2-201ENST00000477363 321 ntBASIC4.18□□□□□ -1.74
PRKNO60260 RN7SL481P-201ENST00000477764 299 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AC004263.1-201ENST00000479327 332 ntBASIC4.18□□□□□ -1.74
PRKNO60260 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.18□□□□□ -1.74
PRKNO60260 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKNO60260 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 OR51K1P-201ENST00000510214 950 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AC108043.1-201ENST00000512696 574 ntBASIC4.18□□□□□ -1.74
PRKNO60260 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.18□□□□□ -1.74
PRKNO60260 OR4A2P-201ENST00000527276 913 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKNO60260 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKNO60260 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.18□□□□□ -1.74
PRKNO60260 AC005412.1-201ENST00000580812 1049 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKNO60260 RN7SL435P-201ENST00000584418 282 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKNO60260 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 AP001542.2-201ENST00000593141 364 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.18□□□□□ -1.74
PRKNO60260 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 AC090181.2-201ENST00000602975 672 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AC007349.4-201ENST00000608114 532 ntBASIC4.18□□□□□ -1.74
PRKNO60260 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 AC024257.5-201ENST00000612739 531 ntBASIC4.18□□□□□ -1.74
PRKNO60260 AC234782.5-201ENST00000617723 324 ntBASIC4.18□□□□□ -1.74
PRKNO60260 VN1R7P-201ENST00000619242 903 ntBASIC4.18□□□□□ -1.74
PRKNO60260 MIR6758-201ENST00000620653 63 ntBASIC4.18□□□□□ -1.74
PRKNO60260 MIR6810-201ENST00000622701 70 ntBASIC4.18□□□□□ -1.74
PRKNO60260 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 LINC02211-204ENST00000642024 1070 ntBASIC4.18□□□□□ -1.74
PRKNO60260 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKNO60260 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKNO60260 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRKNO60260 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.18□□□□□ -1.74
PRKNO60260 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.18□□□□□ -1.74
PRKNO60260 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRKNO60260 AC125257.1-201ENST00000560400 2930 ntBASIC4.18□□□□□ -1.74
PRKNO60260 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.18□□□□□ -1.74
PRKNO60260 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
PRKNO60260 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRKNO60260 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
PRKNO60260 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.17□□□□□ -1.74
PRKNO60260 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PRKNO60260 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.17□□□□□ -1.74
PRKNO60260 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.17□□□□□ -1.74
PRKNO60260 RNU1-87P-201ENST00000363727 170 ntBASIC4.17□□□□□ -1.74
PRKNO60260 RNU4-92P-201ENST00000363783 136 ntBASIC4.17□□□□□ -1.74
PRKNO60260 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms