Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 AC108941.1-201ENST00000502853 530 ntBASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 AL669942.2-201ENST00000620352 697 ntBASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.56□□□□□ -1.52
SHANK2Q9UPX8 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 AC092435.4-201ENST00000623012 4159 ntBASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 RN7SKP284-201ENST00000411002 343 ntBASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 AC005326.1-201ENST00000429197 123 ntBASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 AC069285.2-201ENST00000440210 275 ntBASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 OR52Y1P-201ENST00000452418 828 ntBASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 APOOP2-201ENST00000461561 539 ntBASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 AP000563.1-201ENST00000490865 758 ntBASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 AC135507.2-201ENST00000612443 309 ntBASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 AP000542.2-201ENST00000623199 6179 ntBASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHANK2Q9UPX8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 RNA5SP52-201ENST00000362448 134 ntBASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 OR6K3-202ENST00000368146 996 ntBASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 RNU6-316P-201ENST00000391027 107 ntBASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 AC006480.1-201ENST00000449887 378 ntBASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 SEPT14P1-201ENST00000458703 648 ntBASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 RN7SL807P-201ENST00000470923 297 ntBASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 SNORA70.18-201ENST00000516696 98 ntBASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 AC133552.5-201ENST00000604266 540 ntBASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 AC107294.1-201ENST00000609524 467 ntBASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 AC083843.2-201ENST00000568248 6253 ntBASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHANK2Q9UPX8 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 MAPK10-253ENST00000641010 4072 ntBASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 SNORA48.5-201ENST00000391143 135 ntBASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 RNA5SP306-201ENST00000411087 107 ntBASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 AL691447.1-201ENST00000419456 387 ntBASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 RPL5P23-201ENST00000496040 868 ntBASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 EIF4BP1-201ENST00000554881 351 ntBASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 YPEL5P2-201ENST00000605553 359 ntBASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 AC012603.1-201ENST00000606424 528 ntBASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 AC233263.6-201ENST00000631132 1963 ntBASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHANK2Q9UPX8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.52□□□□□ -1.52
SHANK2Q9UPX8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHANK2Q9UPX8 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHANK2Q9UPX8 AC010740.1-201ENST00000417035 684 ntBASIC5.52□□□□□ -1.53
SHANK2Q9UPX8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.52□□□□□ -1.53
SHANK2Q9UPX8 AJ239321.1-201ENST00000424255 564 ntBASIC5.52□□□□□ -1.53
SHANK2Q9UPX8 OR5AW1P-201ENST00000426334 1006 ntBASIC5.52□□□□□ -1.53
SHANK2Q9UPX8 AC096638.2-201ENST00000434965 711 ntBASIC5.52□□□□□ -1.53
SHANK2Q9UPX8 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.52□□□□□ -1.53
SHANK2Q9UPX8 MRPL35P4-201ENST00000453682 566 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms