Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC108064.1-201ENST00000513791 460 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 RNA5SP179-201ENST00000517284 121 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 AC087369.1-201ENST00000520775 996 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 YPEL5P3-201ENST00000547227 352 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 AC090912.3-201ENST00000609775 533 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 MIR6867-201ENST00000610636 67 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 AC005858.4-201ENST00000623191 700 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 CR392039.5-201ENST00000623201 510 ntBASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPF3BQ9BZI7 AL079305.1-201ENST00000623159 3008 ntBASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 AL603766.1-201ENST00000407763 664 ntBASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 RPL6P5-201ENST00000445678 828 ntBASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 AL133547.1-201ENST00000448546 220 ntBASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 AL360157.1-201ENST00000565962 87 ntBASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 AL713998.2-201ENST00000604538 1198 ntBASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 RNU4-89P-201ENST00000607443 133 ntBASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 RLIMP1-201ENST00000339626 1680 ntBASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 ASNSP1-201ENST00000518311 1939 ntBASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
UPF3BQ9BZI7 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
UPF3BQ9BZI7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
UPF3BQ9BZI7 AL445437.1-201ENST00000623157 3087 ntBASIC4.65□□□□□ -1.66
UPF3BQ9BZI7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
UPF3BQ9BZI7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.65□□□□□ -1.66
UPF3BQ9BZI7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 KRR1P1-201ENST00000419430 803 ntBASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC069157.1-201ENST00000421749 137 ntBASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AL691449.1-201ENST00000426570 421 ntBASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 TPT1P3-201ENST00000492841 512 ntBASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC010460.1-201ENST00000507087 466 ntBASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 MTND2P17-201ENST00000550281 688 ntBASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 SNX6P1-201ENST00000601728 1224 ntBASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC068790.5-201ENST00000602741 355 ntBASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC084757.4-201ENST00000616350 526 ntBASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC243756.2-201ENST00000618406 463 ntBASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 AC015908.5-201ENST00000623289 343 ntBASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
UPF3BQ9BZI7 CASC19-261ENST00000641853 1638 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 AC006504.1-201ENST00000562493 3666 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 AC006042.3-201ENST00000454684 1469 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 AC010329.2-201ENST00000595195 2737 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 ZNF603P-201ENST00000405613 487 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 AC009302.1-201ENST00000417147 390 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 GOT2P5-201ENST00000433995 546 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 AP000936.3-201ENST00000438127 255 ntBASIC4.64□□□□□ -1.67
UPF3BQ9BZI7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms