Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 CYCSP4-201ENST00000429682 331 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RTL9Q8NET4 AC108941.1-201ENST00000502853 530 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 AC022695.1-201ENST00000522089 237 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 AP000889.1-201ENST00000530968 660 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 AC093014.1-201ENST00000548926 724 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 AC090877.1-201ENST00000561418 344 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 AL133247.2-201ENST00000603236 482 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 AL137072.1-201ENST00000603444 466 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 AC092354.2-201ENST00000607786 514 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 AL354760.1-201ENST00000608357 643 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 AC128687.2-201ENST00000609657 566 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 LINC00901.1-201ENST00000617252 152 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 AC015722.2-201ENST00000622210 551 ntBASIC4.67□□□□□ -1.66
RTL9Q8NET4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
RTL9Q8NET4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RTL9Q8NET4 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 SNORA71B-202ENST00000439232 272 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 RPS3AP46-201ENST00000448352 682 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 AC090589.1-201ENST00000473109 362 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 AL358832.1-201ENST00000497800 389 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 AC025445.1-201ENST00000502728 300 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 AC026427.2-201ENST00000506228 536 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 OR2BH1P-201ENST00000608850 864 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 AL591424.2-201ENST00000617023 128 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 AL356274.2-201ENST00000624379 3752 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 DDX18P6-201ENST00000450119 1997 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 AC074029.4-201ENST00000624796 1859 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RTL9Q8NET4 IPO8P1-201ENST00000455509 3109 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RTL9Q8NET4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 LINC01109-201ENST00000603837 3081 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 PRO1804-201ENST00000623780 2050 ntBASIC4.66□□□□□ -1.66
RTL9Q8NET4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RTL9Q8NET4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RTL9Q8NET4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.65□□□□□ -1.66
RTL9Q8NET4 OR52E6-202ENST00000379946 954 ntBASIC4.65□□□□□ -1.66
RTL9Q8NET4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
RTL9Q8NET4 TPTE2P3-201ENST00000441562 1189 ntBASIC4.65□□□□□ -1.66
RTL9Q8NET4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.65□□□□□ -1.66
RTL9Q8NET4 WBP1LP4-201ENST00000505043 344 ntBASIC4.65□□□□□ -1.66
RTL9Q8NET4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.65□□□□□ -1.66
RTL9Q8NET4 HMGN1P11-201ENST00000508668 303 ntBASIC4.65□□□□□ -1.66
RTL9Q8NET4 RN7SKP18-201ENST00000516005 275 ntBASIC4.65□□□□□ -1.66
RTL9Q8NET4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.65□□□□□ -1.66
RTL9Q8NET4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.65□□□□□ -1.66
RTL9Q8NET4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.65□□□□□ -1.66
RTL9Q8NET4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.65□□□□□ -1.66
RTL9Q8NET4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.65□□□□□ -1.66
RTL9Q8NET4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.65□□□□□ -1.66
RTL9Q8NET4 AL390816.3-201ENST00000604527 1066 ntBASIC4.65□□□□□ -1.66
RTL9Q8NET4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.65□□□□□ -1.66
RTL9Q8NET4 AC119674.1-207ENST00000641355 633 ntBASIC4.65□□□□□ -1.66
RTL9Q8NET4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
RTL9Q8NET4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RTL9Q8NET4 AC087190.4-201ENST00000574616 8334 ntBASIC4.65□□□□□ -1.66
RTL9Q8NET4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RTL9Q8NET4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RTL9Q8NET4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RTL9Q8NET4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RTL9Q8NET4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RTL9Q8NET4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RTL9Q8NET4 SNORD74.4-201ENST00000364129 80 ntBASIC4.65□□□□□ -1.67
RTL9Q8NET4 MIR218-2-201ENST00000385006 110 ntBASIC4.65□□□□□ -1.67
RTL9Q8NET4 MIR93-201ENST00000385024 80 ntBASIC4.65□□□□□ -1.67
RTL9Q8NET4 SNORA68.2-201ENST00000391263 128 ntBASIC4.65□□□□□ -1.67
RTL9Q8NET4 AL121834.1-202ENST00000404494 277 ntBASIC4.65□□□□□ -1.67
RTL9Q8NET4 RNU2-65P-201ENST00000410162 185 ntBASIC4.65□□□□□ -1.67
RTL9Q8NET4 RNA5SP104-201ENST00000410989 118 ntBASIC4.65□□□□□ -1.67
RTL9Q8NET4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.65□□□□□ -1.67
RTL9Q8NET4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.65□□□□□ -1.67
RTL9Q8NET4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RTL9Q8NET4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.65□□□□□ -1.67
RTL9Q8NET4 APOOP2-201ENST00000461561 539 ntBASIC4.65□□□□□ -1.67
RTL9Q8NET4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.65□□□□□ -1.67
RTL9Q8NET4 RNA5SP208-201ENST00000516156 78 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms