Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
LYSMD3Q7Z3D4 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AKAP17BP-201ENST00000431706 2719 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AC025809.2-201ENST00000625085 1802 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 RNA5SP85-201ENST00000365378 119 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6-1013P-201ENST00000384180 107 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6-606P-201ENST00000384721 111 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 MIR621-201ENST00000384919 96 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6-272P-201ENST00000411028 104 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 METTL15P3-201ENST00000415522 1221 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 MCFD2P1-201ENST00000417812 300 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AC096644.2-201ENST00000429278 159 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AL731534.1-201ENST00000434711 269 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 Y_RNA.653-201ENST00000459091 95 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 RN7SL168P-201ENST00000463821 279 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 GMFBP1-201ENST00000467831 427 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AC006512.1-201ENST00000468816 291 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AC098818.1-201ENST00000478593 252 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 RPL21P99-201ENST00000480369 423 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AC093664.1-201ENST00000511779 289 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6-406P-201ENST00000516470 107 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 HMGB1P19-201ENST00000517578 577 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 IGKV2D-10-201ENST00000520194 281 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 SUMO2P20-201ENST00000520803 283 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 RN7SL208P-201ENST00000577964 296 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AC022893.3-201ENST00000607665 437 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 AL157817.1-201ENST00000614264 790 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 U1.41-201ENST00000617626 165 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 MRPL57P1-201ENST00000621486 265 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 MAPK10-357ENST00000641831 2858 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 TMCC1P1-201ENST00000518897 1980 ntBASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.56□□□□□ -1.36
LYSMD3Q7Z3D4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AC093311.1-201ENST00000506586 2021 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 RNU4-7P-201ENST00000364758 141 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 MRPS6P2-201ENST00000381143 370 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 Y_RNA.574-201ENST00000384766 95 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 RN7SKP158-201ENST00000410453 326 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AC074085.1-201ENST00000413598 418 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AC008267.5-201ENST00000424928 265 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AC128677.1-201ENST00000436016 442 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AC099670.1-201ENST00000455141 783 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 RPL30P15-201ENST00000457129 321 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6-976P-201ENST00000516086 111 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 OR52K3P-201ENST00000531655 943 ntBASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.55□□□□□ -1.36
LYSMD3Q7Z3D4 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms