Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC084759.1-201ENST00000561168 290 ntBASIC5.33□□□□□ -1.56
PTCH1Q13635 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCH1Q13635 CYP4A43P-201ENST00000568156 121 ntBASIC5.33□□□□□ -1.56
PTCH1Q13635 AP005262.1-201ENST00000582646 997 ntBASIC5.33□□□□□ -1.56
PTCH1Q13635 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.33□□□□□ -1.56
PTCH1Q13635 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCH1Q13635 AL392088.2-201ENST00000637607 285 ntBASIC5.33□□□□□ -1.56
PTCH1Q13635 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCH1Q13635 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCH1Q13635 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCH1Q13635 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCH1Q13635 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCH1Q13635 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCH1Q13635 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCH1Q13635 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PTCH1Q13635 MIR128-1-201ENST00000384921 82 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCH1Q13635 AL391219.1-201ENST00000422570 483 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 HMGB1P37-201ENST00000439613 609 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 MTCO3P17-201ENST00000443775 513 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 SNORD105B-201ENST00000458770 79 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 AL136126.1-201ENST00000473603 402 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 AP001960.1-201ENST00000506494 658 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.32□□□□□ -1.56
PTCH1Q13635 HSPD1P11-201ENST00000508643 1702 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCH1Q13635 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCH1Q13635 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.32□□□□□ -1.56
PTCH1Q13635 AL358913.1-201ENST00000554342 121 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.32□□□□□ -1.56
PTCH1Q13635 AL137843.1-201ENST00000605078 385 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 AC067838.1-201ENST00000606064 577 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 AL513477.2-201ENST00000607858 568 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 AL158062.1-201ENST00000619632 745 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 AL139089.1-201ENST00000620372 975 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 MIR6852-201ENST00000621699 66 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCH1Q13635 AL596275.2-204ENST00000641628 552 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 AL596275.2-206ENST00000641957 626 ntBASIC5.32□□□□□ -1.56
PTCH1Q13635 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCH1Q13635 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCH1Q13635 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PTCH1Q13635 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCH1Q13635 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCH1Q13635 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCH1Q13635 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCH1Q13635 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
PTCH1Q13635 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PTCH1Q13635 AC106901.1-201ENST00000425086 698 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCH1Q13635 AC097713.2-201ENST00000430199 356 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 UBE2DNL-203ENST00000474922 222 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 RPL32P34-201ENST00000486380 400 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCH1Q13635 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.31□□□□□ -1.56
PTCH1Q13635 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.31□□□□□ -1.56
PTCH1Q13635 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCH1Q13635 AL159169.2-201ENST00000610061 1269 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.31□□□□□ -1.56
PTCH1Q13635 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCH1Q13635 AC119674.1-207ENST00000641355 633 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCH1Q13635 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCH1Q13635 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCH1Q13635 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCH1Q13635 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCH1Q13635 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCH1Q13635 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCH1Q13635 MIR1289-1-201ENST00000408836 144 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 RAB9AP5-201ENST00000437794 597 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 AC006994.1-201ENST00000438212 839 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 RAB9AP2-201ENST00000443911 597 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 AP001486.1-201ENST00000463339 476 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 RPS4XP10-201ENST00000465034 731 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 MTND6P6-201ENST00000478031 263 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 RAC1P2-201ENST00000511164 579 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCH1Q13635 RN7SKP34-201ENST00000516142 244 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 SNORA70.17-201ENST00000516449 133 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCH1Q13635 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.31□□□□□ -1.56
PTCH1Q13635 AL137849.1-201ENST00000604767 169 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 AL669942.2-201ENST00000620352 697 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 AC079684.1-201ENST00000621405 437 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 AC074140.1-201ENST00000621617 208 ntBASIC5.31□□□□□ -1.56
PTCH1Q13635 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCH1Q13635 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
PTCH1Q13635 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PTCH1Q13635 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PTCH1Q13635 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PTCH1Q13635 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.3□□□□□ -1.56
PTCH1Q13635 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTCH1Q13635 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PTCH1Q13635 RNA5SP52-201ENST00000362448 134 ntBASIC5.3□□□□□ -1.56
PTCH1Q13635 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.3□□□□□ -1.56
PTCH1Q13635 GNG5P5-201ENST00000420444 220 ntBASIC5.3□□□□□ -1.56
PTCH1Q13635 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.3□□□□□ -1.56
PTCH1Q13635 APOOP2-201ENST00000461561 539 ntBASIC5.3□□□□□ -1.56
PTCH1Q13635 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms