Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.69□□□□□ -1.66
RAE1P78406 MIR6729-201ENST00000618194 65 ntBASIC4.69□□□□□ -1.66
RAE1P78406 AC243756.2-201ENST00000618406 463 ntBASIC4.69□□□□□ -1.66
RAE1P78406 MIR6886-201ENST00000619864 61 ntBASIC4.69□□□□□ -1.66
RAE1P78406 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 AC009313.2-201ENST00000417893 1941 ntBASIC4.69□□□□□ -1.66
RAE1P78406 AC134882.1-201ENST00000603738 1676 ntBASIC4.69□□□□□ -1.66
RAE1P78406 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.69□□□□□ -1.66
RAE1P78406 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RAE1P78406 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.69□□□□□ -1.66
RAE1P78406 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.69□□□□□ -1.66
RAE1P78406 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.68□□□□□ -1.66
RAE1P78406 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.68□□□□□ -1.66
RAE1P78406 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.68□□□□□ -1.66
RAE1P78406 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RAE1P78406 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
RAE1P78406 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RAE1P78406 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.68□□□□□ -1.66
RAE1P78406 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.68□□□□□ -1.66
RAE1P78406 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.68□□□□□ -1.66
RAE1P78406 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAE1P78406 AL590763.1-201ENST00000398297 1545 ntBASIC4.68□□□□□ -1.66
RAE1P78406 MTCO1P11-201ENST00000429111 1528 ntBASIC4.68□□□□□ -1.66
RAE1P78406 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAE1P78406 AC008549.2-201ENST00000333482 706 ntBASIC4.68□□□□□ -1.66
RAE1P78406 U8.4-201ENST00000363626 134 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AL031577.2-201ENST00000404133 280 ntBASIC4.68□□□□□ -1.66
RAE1P78406 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAE1P78406 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.68□□□□□ -1.66
RAE1P78406 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.68□□□□□ -1.66
RAE1P78406 AL355433.1-201ENST00000422804 300 ntBASIC4.68□□□□□ -1.66
RAE1P78406 CKS1BP6-201ENST00000424932 240 ntBASIC4.68□□□□□ -1.66
RAE1P78406 RPL31P54-201ENST00000429803 370 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.68□□□□□ -1.66
RAE1P78406 RPS26P40-201ENST00000435209 294 ntBASIC4.68□□□□□ -1.66
RAE1P78406 RPS25P9-201ENST00000435591 252 ntBASIC4.68□□□□□ -1.66
RAE1P78406 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.68□□□□□ -1.66
RAE1P78406 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.68□□□□□ -1.66
RAE1P78406 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.68□□□□□ -1.66
RAE1P78406 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.68□□□□□ -1.66
RAE1P78406 AL591363.1-201ENST00000450091 483 ntBASIC4.68□□□□□ -1.66
RAE1P78406 DDX39BP2-208ENST00000453923 258 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.68□□□□□ -1.66
RAE1P78406 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.68□□□□□ -1.66
RAE1P78406 AC005532.2-201ENST00000467154 373 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.68□□□□□ -1.66
RAE1P78406 AC104689.1-201ENST00000473356 768 ntBASIC4.68□□□□□ -1.66
RAE1P78406 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.68□□□□□ -1.66
RAE1P78406 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.68□□□□□ -1.66
RAE1P78406 UBA52P3-201ENST00000491303 382 ntBASIC4.68□□□□□ -1.66
RAE1P78406 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AC112198.1-201ENST00000505369 1220 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.68□□□□□ -1.66
RAE1P78406 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.68□□□□□ -1.66
RAE1P78406 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.68□□□□□ -1.66
RAE1P78406 ATP1B1P1-201ENST00000509767 915 ntBASIC4.68□□□□□ -1.66
RAE1P78406 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.68□□□□□ -1.66
RAE1P78406 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RAE1P78406 MTND5P13-201ENST00000513046 1079 ntBASIC4.68□□□□□ -1.66
RAE1P78406 RNU6-347P-201ENST00000516658 105 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.68□□□□□ -1.66
RAE1P78406 AC022832.1-201ENST00000530718 645 ntBASIC4.68□□□□□ -1.66
RAE1P78406 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RAE1P78406 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.68□□□□□ -1.66
RAE1P78406 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.68□□□□□ -1.66
RAE1P78406 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.68□□□□□ -1.66
RAE1P78406 AC092490.3-201ENST00000545370 572 ntBASIC4.68□□□□□ -1.66
RAE1P78406 BNIP3P1-201ENST00000547295 580 ntBASIC4.68□□□□□ -1.66
RAE1P78406 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAE1P78406 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.68□□□□□ -1.66
RAE1P78406 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.68□□□□□ -1.66
RAE1P78406 ACTR3BP3-201ENST00000565577 979 ntBASIC4.68□□□□□ -1.66
RAE1P78406 MTCYBP28-201ENST00000566728 1132 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.68□□□□□ -1.66
RAE1P78406 MIR3691-201ENST00000578066 90 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AC006116.3-201ENST00000592968 361 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.68□□□□□ -1.66
RAE1P78406 SUMO2P15-201ENST00000604285 278 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AC093799.2-201ENST00000610062 578 ntBASIC4.68□□□□□ -1.66
RAE1P78406 HULC.1-201ENST00000612720 240 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AL022401.1-201ENST00000619498 108 ntBASIC4.68□□□□□ -1.66
RAE1P78406 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RAE1P78406 AC007494.3-201ENST00000624660 743 ntBASIC4.68□□□□□ -1.66
RAE1P78406 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.68□□□□□ -1.66
RAE1P78406 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.68□□□□□ -1.66
RAE1P78406 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAE1P78406 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAE1P78406 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
RAE1P78406 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.68□□□□□ -1.66
RAE1P78406 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAE1P78406 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RAE1P78406 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAE1P78406 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RAE1P78406 AL353743.4-201ENST00000422653 1547 ntBASIC4.67□□□□□ -1.66
RAE1P78406 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.67□□□□□ -1.66
RAE1P78406 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RAE1P78406 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.67□□□□□ -1.66
RAE1P78406 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.67□□□□□ -1.66
RAE1P78406 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.67□□□□□ -1.66
RAE1P78406 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms