Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 OR8Q1P-201ENST00000526467 655 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 PCNAP4-201ENST00000532690 730 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 AK6P1-201ENST00000540219 478 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA1P56159 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.37□□□□□ -1.55
GFRA1P56159 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.37□□□□□ -1.55
GFRA1P56159 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA1P56159 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AC009268.2-201ENST00000621925 457 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AL732618.1-201ENST00000623251 301 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 SNX18P12-201ENST00000624821 759 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA1P56159 CYP3A51P-201ENST00000633513 256 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 AC010149.2-201ENST00000637608 315 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
GFRA1P56159 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA1P56159 CASC19-221ENST00000641309 1382 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA1P56159 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
GFRA1P56159 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA1P56159 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA1P56159 MTND5P28-201ENST00000438005 1594 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA1P56159 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.37□□□□□ -1.55
GFRA1P56159 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA1P56159 AC025574.1-201ENST00000554784 1653 ntBASIC5.37□□□□□ -1.55
GFRA1P56159 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA1P56159 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 AC020633.1-201ENST00000468439 2247 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
GFRA1P56159 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA1P56159 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.36□□□□□ -1.55
GFRA1P56159 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
GFRA1P56159 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 Y_RNA.46-201ENST00000362695 102 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 RNU6-1085P-201ENST00000363576 107 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 RNU6-853P-201ENST00000364306 107 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 Y_RNA.295-201ENST00000364918 102 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 RNA5SP211-201ENST00000365516 117 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA1P56159 MTND4LP20-201ENST00000402379 270 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 RPL7P58-201ENST00000402913 758 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA1P56159 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.36□□□□□ -1.55
GFRA1P56159 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.36□□□□□ -1.55
GFRA1P56159 MTCO1P20-201ENST00000425366 358 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA1P56159 AC099677.3-201ENST00000427081 395 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 AC133104.1-201ENST00000429100 218 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.36□□□□□ -1.55
GFRA1P56159 RPL31P35-201ENST00000431058 377 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.36□□□□□ -1.55
GFRA1P56159 AL731534.1-201ENST00000434711 269 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.36□□□□□ -1.55
GFRA1P56159 AL162739.1-201ENST00000450606 307 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA1P56159 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA1P56159 AC128716.1-201ENST00000475129 166 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 AC124945.1-201ENST00000485133 188 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 AC041039.1-201ENST00000485656 536 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.36□□□□□ -1.55
GFRA1P56159 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.36□□□□□ -1.55
GFRA1P56159 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.36□□□□□ -1.55
GFRA1P56159 RNU6-201P-201ENST00000517100 61 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.36□□□□□ -1.55
GFRA1P56159 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.36□□□□□ -1.55
GFRA1P56159 AL512310.1-201ENST00000548639 172 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.36□□□□□ -1.55
GFRA1P56159 AC092121.1-201ENST00000569452 202 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.36□□□□□ -1.55
GFRA1P56159 COX6CP7-201ENST00000597056 208 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 AC017083.3-201ENST00000609955 700 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.36□□□□□ -1.55
GFRA1P56159 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 uc_338.26-201ENST00000612659 160 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA1P56159 AC009033.1-201ENST00000624279 431 ntBASIC5.36□□□□□ -1.55
GFRA1P56159 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.36□□□□□ -1.55
GFRA1P56159 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
GFRA1P56159 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.36□□□□□ -1.55
GFRA1P56159 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA1P56159 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms