Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.49□□□□□ -1.69
NUP98P52948 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
NUP98P52948 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUP98P52948 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.48□□□□□ -1.69
NUP98P52948 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP98P52948 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
NUP98P52948 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP98P52948 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP98P52948 RNA5SP42-201ENST00000364278 115 ntBASIC4.48□□□□□ -1.69
NUP98P52948 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP98P52948 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP98P52948 RNA5SP120-201ENST00000410900 112 ntBASIC4.48□□□□□ -1.69
NUP98P52948 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP98P52948 AC117434.1-201ENST00000419971 836 ntBASIC4.48□□□□□ -1.69
NUP98P52948 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP98P52948 OR5AW1P-201ENST00000426334 1006 ntBASIC4.48□□□□□ -1.69
NUP98P52948 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.48□□□□□ -1.69
NUP98P52948 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.48□□□□□ -1.69
NUP98P52948 AC010285.3-201ENST00000511668 676 ntBASIC4.48□□□□□ -1.69
NUP98P52948 RN7SKP57-201ENST00000517248 293 ntBASIC4.48□□□□□ -1.69
NUP98P52948 IGKV2-23-201ENST00000518729 323 ntBASIC4.48□□□□□ -1.69
NUP98P52948 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.48□□□□□ -1.69
NUP98P52948 AC103843.2-201ENST00000530523 682 ntBASIC4.48□□□□□ -1.69
NUP98P52948 AL133457.1-201ENST00000564251 987 ntBASIC4.48□□□□□ -1.69
NUP98P52948 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.48□□□□□ -1.69
NUP98P52948 OR51C1P-201ENST00000608504 942 ntBASIC4.48□□□□□ -1.69
NUP98P52948 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.48□□□□□ -1.69
NUP98P52948 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP98P52948 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUP98P52948 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.48□□□□□ -1.69
NUP98P52948 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.47□□□□□ -1.69
NUP98P52948 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP98P52948 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP98P52948 SAGE2P-201ENST00000420011 2126 ntBASIC4.47□□□□□ -1.69
NUP98P52948 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NUP98P52948 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.47□□□□□ -1.69
NUP98P52948 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.47□□□□□ -1.69
NUP98P52948 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.47□□□□□ -1.69
NUP98P52948 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.47□□□□□ -1.69
NUP98P52948 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUP98P52948 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
NUP98P52948 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.47□□□□□ -1.69
NUP98P52948 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUP98P52948 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP98P52948 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUP98P52948 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NUP98P52948 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.47□□□□□ -1.69
NUP98P52948 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
NUP98P52948 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
NUP98P52948 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.46□□□□□ -1.69
NUP98P52948 AC009237.5-201ENST00000414271 501 ntBASIC4.46□□□□□ -1.69
NUP98P52948 AL512649.1-201ENST00000428997 581 ntBASIC4.46□□□□□ -1.69
NUP98P52948 AC005326.1-201ENST00000429197 123 ntBASIC4.46□□□□□ -1.69
NUP98P52948 RPS15AP29-201ENST00000445539 400 ntBASIC4.46□□□□□ -1.69
NUP98P52948 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.46□□□□□ -1.69
NUP98P52948 AC109458.1-201ENST00000508858 316 ntBASIC4.46□□□□□ -1.69
NUP98P52948 AC010342.1-201ENST00000514047 877 ntBASIC4.46□□□□□ -1.69
NUP98P52948 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.46□□□□□ -1.69
NUP98P52948 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.46□□□□□ -1.69
NUP98P52948 AC127502.3-201ENST00000636170 1206 ntBASIC4.46□□□□□ -1.69
NUP98P52948 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
NUP98P52948 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP98P52948 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.46□□□□□ -1.7
NUP98P52948 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NUP98P52948 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NUP98P52948 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP98P52948 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP98P52948 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP98P52948 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.46□□□□□ -1.7
NUP98P52948 NACAP7-201ENST00000407371 609 ntBASIC4.46□□□□□ -1.7
NUP98P52948 Z92545.1-201ENST00000411782 234 ntBASIC4.46□□□□□ -1.7
NUP98P52948 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.46□□□□□ -1.7
NUP98P52948 HIGD1AP12-201ENST00000427832 281 ntBASIC4.46□□□□□ -1.7
NUP98P52948 AC097713.2-201ENST00000430199 356 ntBASIC4.46□□□□□ -1.7
NUP98P52948 RPL12P18-201ENST00000437175 325 ntBASIC4.46□□□□□ -1.7
NUP98P52948 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
NUP98P52948 RN7SKP209-201ENST00000516888 304 ntBASIC4.46□□□□□ -1.7
NUP98P52948 AP006245.1-201ENST00000522549 120 ntBASIC4.46□□□□□ -1.7
NUP98P52948 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.46□□□□□ -1.7
NUP98P52948 SULT1C2P2-201ENST00000562517 294 ntBASIC4.46□□□□□ -1.7
NUP98P52948 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP98P52948 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.46□□□□□ -1.7
NUP98P52948 AP001002.2-201ENST00000625137 386 ntBASIC4.46□□□□□ -1.7
NUP98P52948 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUP98P52948 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
NUP98P52948 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
NUP98P52948 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.45□□□□□ -1.7
NUP98P52948 AC090337.1-201ENST00000579651 2074 ntBASIC4.45□□□□□ -1.7
NUP98P52948 AC139426.3-201ENST00000605648 2059 ntBASIC4.45□□□□□ -1.7
NUP98P52948 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NUP98P52948 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.45□□□□□ -1.7
NUP98P52948 SNORD74.4-201ENST00000364129 80 ntBASIC4.45□□□□□ -1.7
NUP98P52948 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP98P52948 AL391219.1-201ENST00000422570 483 ntBASIC4.45□□□□□ -1.7
NUP98P52948 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.45□□□□□ -1.7
NUP98P52948 AC092809.1-201ENST00000441469 474 ntBASIC4.45□□□□□ -1.7
NUP98P52948 RPS4XP2-201ENST00000458402 793 ntBASIC4.45□□□□□ -1.7
NUP98P52948 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.45□□□□□ -1.7
NUP98P52948 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.45□□□□□ -1.7
NUP98P52948 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms