Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 FTLP6-201ENST00000355274 422 ntBASIC2.23□□□□□ -2.05
APOBP04114 Z99755.1-201ENST00000414048 380 ntBASIC2.23□□□□□ -2.05
APOBP04114 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC2.23□□□□□ -2.05
APOBP04114 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 AC026333.2-201ENST00000542164 106 ntBASIC2.23□□□□□ -2.05
APOBP04114 AC135001.1-201ENST00000544546 283 ntBASIC2.23□□□□□ -2.05
APOBP04114 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC2.23□□□□□ -2.05
APOBP04114 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC2.23□□□□□ -2.05
APOBP04114 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC2.23□□□□□ -2.05
APOBP04114 AF117829.1-206ENST00000621883 3802 ntBASIC2.23□□□□□ -2.05
APOBP04114 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
APOBP04114 HSPD1P11-201ENST00000508643 1702 ntBASIC2.23□□□□□ -2.05
APOBP04114 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
APOBP04114 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
APOBP04114 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.23□□□□□ -2.05
APOBP04114 AC063979.1-201ENST00000415539 377 ntBASIC2.23□□□□□ -2.05
APOBP04114 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 ATP5C1P1-201ENST00000441945 895 ntBASIC2.23□□□□□ -2.05
APOBP04114 KC877373.1-201ENST00000479066 408 ntBASIC2.23□□□□□ -2.05
APOBP04114 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.23□□□□□ -2.05
APOBP04114 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.23□□□□□ -2.05
APOBP04114 NRBF2P5-201ENST00000603087 788 ntBASIC2.23□□□□□ -2.05
APOBP04114 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.23□□□□□ -2.05
APOBP04114 AC015802.5-201ENST00000607478 399 ntBASIC2.23□□□□□ -2.05
APOBP04114 AC093732.2-201ENST00000607950 274 ntBASIC2.23□□□□□ -2.05
APOBP04114 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.23□□□□□ -2.05
APOBP04114 AL451142.2-201ENST00000429076 2090 ntBASIC2.23□□□□□ -2.05
APOBP04114 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC2.23□□□□□ -2.05
APOBP04114 AP002001.2-201ENST00000529025 1469 ntBASIC2.23□□□□□ -2.05
APOBP04114 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
APOBP04114 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
APOBP04114 NANOGNBP1-201ENST00000448444 480 ntBASIC2.22□□□□□ -2.05
APOBP04114 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
APOBP04114 U3.44-201ENST00000458938 192 ntBASIC2.22□□□□□ -2.05
APOBP04114 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC2.22□□□□□ -2.05
APOBP04114 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.22□□□□□ -2.05
APOBP04114 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC2.22□□□□□ -2.05
APOBP04114 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
APOBP04114 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.22□□□□□ -2.05
APOBP04114 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
APOBP04114 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 RN7SKP53-201ENST00000411337 315 ntBASIC2.22□□□□□ -2.05
APOBP04114 RPS4XP2-201ENST00000458402 793 ntBASIC2.22□□□□□ -2.05
APOBP04114 AC073657.2-201ENST00000605661 303 ntBASIC2.22□□□□□ -2.05
APOBP04114 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.22□□□□□ -2.05
APOBP04114 AC015813.6-201ENST00000624409 5808 ntBASIC2.22□□□□□ -2.05
APOBP04114 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 VDAC2P1-201ENST00000399358 958 ntBASIC2.22□□□□□ -2.05
APOBP04114 RN7SKP97-201ENST00000410966 333 ntBASIC2.22□□□□□ -2.05
APOBP04114 AC010740.1-201ENST00000417035 684 ntBASIC2.22□□□□□ -2.05
APOBP04114 AC000041.1-201ENST00000439655 175 ntBASIC2.22□□□□□ -2.05
APOBP04114 RPL7L1P13-201ENST00000511702 739 ntBASIC2.22□□□□□ -2.05
APOBP04114 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.22□□□□□ -2.05
APOBP04114 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.22□□□□□ -2.05
APOBP04114 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.22□□□□□ -2.05
APOBP04114 AC124312.4-201ENST00000605533 310 ntBASIC2.22□□□□□ -2.05
APOBP04114 AC012603.1-201ENST00000606424 528 ntBASIC2.22□□□□□ -2.05
APOBP04114 MIR8069-1-201ENST00000616627 86 ntBASIC2.22□□□□□ -2.05
APOBP04114 MIR8069-2-201ENST00000621412 86 ntBASIC2.22□□□□□ -2.05
APOBP04114 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC2.22□□□□□ -2.05
APOBP04114 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
APOBP04114 AL022322.2-201ENST00000624072 20397 ntBASIC2.22□□□□□ -2.05
APOBP04114 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOBP04114 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.22□□□□□ -2.05
APOBP04114 PRELID3BP10-201ENST00000431957 584 ntBASIC2.22□□□□□ -2.05
APOBP04114 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.22□□□□□ -2.05
APOBP04114 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.22□□□□□ -2.05
APOBP04114 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.22□□□□□ -2.05
APOBP04114 RPL21P11-201ENST00000461458 483 ntBASIC2.22□□□□□ -2.05
APOBP04114 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.22□□□□□ -2.05
APOBP04114 RPL7P38-201ENST00000488396 739 ntBASIC2.22□□□□□ -2.05
APOBP04114 AC139783.2-201ENST00000504847 1145 ntBASIC2.22□□□□□ -2.05
APOBP04114 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.22□□□□□ -2.05
APOBP04114 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC2.22□□□□□ -2.05
APOBP04114 CKS1BP3-201ENST00000600888 237 ntBASIC2.22□□□□□ -2.05
APOBP04114 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms