Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNRNP200O75643 ZNF602P-201ENST00000405929 924 ntBASIC3.5□□□□□ -1.85
SNRNP200O75643 AL139039.2-201ENST00000407436 479 ntBASIC3.5□□□□□ -1.85
SNRNP200O75643 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNRNP200O75643 RNA5SP44-201ENST00000410446 133 ntBASIC3.5□□□□□ -1.85
SNRNP200O75643 RPL23AP82-202ENST00000427528 469 ntBASIC3.5□□□□□ -1.85
SNRNP200O75643 RPL7P4-203ENST00000430239 730 ntBASIC3.5□□□□□ -1.85
SNRNP200O75643 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.5□□□□□ -1.85
SNRNP200O75643 CENPBD1P1-201ENST00000464061 469 ntBASIC3.5□□□□□ -1.85
SNRNP200O75643 ACTR3P3-201ENST00000480448 893 ntBASIC3.5□□□□□ -1.85
SNRNP200O75643 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.5□□□□□ -1.85
SNRNP200O75643 AL121834.1-201ENST00000572284 509 ntBASIC3.5□□□□□ -1.85
SNRNP200O75643 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.5□□□□□ -1.85
SNRNP200O75643 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNRNP200O75643 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.5□□□□□ -1.85
SNRNP200O75643 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.5□□□□□ -1.85
SNRNP200O75643 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.5□□□□□ -1.85
SNRNP200O75643 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNRNP200O75643 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNRNP200O75643 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.5□□□□□ -1.85
SNRNP200O75643 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.5□□□□□ -1.85
SNRNP200O75643 FRG1CP-201ENST00000358464 769 ntBASIC3.5□□□□□ -1.85
SNRNP200O75643 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SNRNP200O75643 U3.39-201ENST00000408569 239 ntBASIC3.5□□□□□ -1.85
SNRNP200O75643 RPL21P109-201ENST00000422213 475 ntBASIC3.5□□□□□ -1.85
SNRNP200O75643 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.5□□□□□ -1.85
SNRNP200O75643 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.5□□□□□ -1.85
SNRNP200O75643 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.5□□□□□ -1.85
SNRNP200O75643 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.5□□□□□ -1.85
SNRNP200O75643 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.5□□□□□ -1.85
SNRNP200O75643 CR392039.5-201ENST00000623201 510 ntBASIC3.5□□□□□ -1.85
SNRNP200O75643 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.5□□□□□ -1.85
SNRNP200O75643 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNRNP200O75643 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
SNRNP200O75643 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNRNP200O75643 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SNRNP200O75643 CYP1D1P-201ENST00000416662 1433 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.49□□□□□ -1.85
SNRNP200O75643 RNU4-35P-201ENST00000362588 141 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.49□□□□□ -1.85
SNRNP200O75643 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.49□□□□□ -1.85
SNRNP200O75643 ELOCP18-201ENST00000434209 337 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.49□□□□□ -1.85
SNRNP200O75643 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.49□□□□□ -1.85
SNRNP200O75643 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.49□□□□□ -1.85
SNRNP200O75643 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.49□□□□□ -1.85
SNRNP200O75643 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.49□□□□□ -1.85
SNRNP200O75643 AC016957.2-201ENST00000616998 848 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 AC009093.8-201ENST00000641769 292 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNRNP200O75643 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SNRNP200O75643 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SNRNP200O75643 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNRNP200O75643 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SNRNP200O75643 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNRNP200O75643 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SNRNP200O75643 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SNRNP200O75643 MIR448-201ENST00000362131 111 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SNRNP200O75643 JKAMPP1-201ENST00000413804 919 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SNRNP200O75643 AF228730.2-201ENST00000438784 848 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.49□□□□□ -1.85
SNRNP200O75643 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SNRNP200O75643 AC007537.2-201ENST00000472093 511 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 AC005726.1-201ENST00000494679 427 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
SNRNP200O75643 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.49□□□□□ -1.85
SNRNP200O75643 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.49□□□□□ -1.85
SNRNP200O75643 SOD1P3-201ENST00000518682 454 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 AP006245.1-201ENST00000522549 120 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.49□□□□□ -1.85
SNRNP200O75643 AC092747.2-201ENST00000545069 983 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.49□□□□□ -1.85
SNRNP200O75643 AP000553.6-201ENST00000641242 118 ntBASIC3.49□□□□□ -1.85
SNRNP200O75643 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.49□□□□□ -1.85
SNRNP200O75643 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.48□□□□□ -1.85
SNRNP200O75643 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.48□□□□□ -1.85
SNRNP200O75643 MTND5P12-201ENST00000502851 1449 ntBASIC3.48□□□□□ -1.85
SNRNP200O75643 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SNRNP200O75643 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNRNP200O75643 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNRNP200O75643 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNRNP200O75643 MTND2P11-201ENST00000423638 648 ntBASIC3.48□□□□□ -1.85
SNRNP200O75643 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.48□□□□□ -1.85
SNRNP200O75643 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SNRNP200O75643 AL451050.1-201ENST00000450126 415 ntBASIC3.48□□□□□ -1.85
SNRNP200O75643 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SNRNP200O75643 UBA52P3-201ENST00000491303 382 ntBASIC3.48□□□□□ -1.85
SNRNP200O75643 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.48□□□□□ -1.85
SNRNP200O75643 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.48□□□□□ -1.85
SNRNP200O75643 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNRNP200O75643 RPL21P12-201ENST00000559810 515 ntBASIC3.48□□□□□ -1.85
SNRNP200O75643 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.48□□□□□ -1.85
SNRNP200O75643 AC245389.2-201ENST00000616023 576 ntBASIC3.48□□□□□ -1.85
SNRNP200O75643 AL355365.1-201ENST00000616480 294 ntBASIC3.48□□□□□ -1.85
SNRNP200O75643 AC009237.17-201ENST00000618111 748 ntBASIC3.48□□□□□ -1.85
SNRNP200O75643 AC242843.1-201ENST00000618702 573 ntBASIC3.48□□□□□ -1.85
SNRNP200O75643 OR6C71P-202ENST00000641886 1107 ntBASIC3.48□□□□□ -1.85
SNRNP200O75643 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms