Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SDC3O75056 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SDC3O75056 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SDC3O75056 GTF2H2B-203ENST00000508065 1432 ntBASIC4.21□□□□□ -1.74
SDC3O75056 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.21□□□□□ -1.74
SDC3O75056 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.21□□□□□ -1.74
SDC3O75056 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SDC3O75056 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
SDC3O75056 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SDC3O75056 AC074029.4-201ENST00000624796 1859 ntBASIC4.2□□□□□ -1.74
SDC3O75056 RLIMP1-201ENST00000339626 1680 ntBASIC4.2□□□□□ -1.74
SDC3O75056 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SDC3O75056 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SDC3O75056 AC017104.4-201ENST00000636283 1592 ntBASIC4.2□□□□□ -1.74
SDC3O75056 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SDC3O75056 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.2□□□□□ -1.74
SDC3O75056 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.2□□□□□ -1.74
SDC3O75056 MIR142-201ENST00000384835 87 ntBASIC4.2□□□□□ -1.74
SDC3O75056 OR8G2P-201ENST00000412796 908 ntBASIC4.2□□□□□ -1.74
SDC3O75056 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.2□□□□□ -1.74
SDC3O75056 PDSS1P1-201ENST00000422953 1114 ntBASIC4.2□□□□□ -1.74
SDC3O75056 MORF4L1P7-201ENST00000426038 703 ntBASIC4.2□□□□□ -1.74
SDC3O75056 MRPL50P1-201ENST00000431951 384 ntBASIC4.2□□□□□ -1.74
SDC3O75056 RPEP2-201ENST00000432149 701 ntBASIC4.2□□□□□ -1.74
SDC3O75056 CEACAMP1-201ENST00000434624 1035 ntBASIC4.2□□□□□ -1.74
SDC3O75056 AC069285.2-201ENST00000440210 275 ntBASIC4.2□□□□□ -1.74
SDC3O75056 AL512326.1-201ENST00000443050 721 ntBASIC4.2□□□□□ -1.74
SDC3O75056 MTND2P8-201ENST00000450555 1025 ntBASIC4.2□□□□□ -1.74
SDC3O75056 DDX39BP2-208ENST00000453923 258 ntBASIC4.2□□□□□ -1.74
SDC3O75056 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SDC3O75056 RN7SL132P-201ENST00000478131 296 ntBASIC4.2□□□□□ -1.74
SDC3O75056 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.2□□□□□ -1.74
SDC3O75056 RPS4XP18-201ENST00000495480 763 ntBASIC4.2□□□□□ -1.74
SDC3O75056 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.2□□□□□ -1.74
SDC3O75056 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.2□□□□□ -1.74
SDC3O75056 VTA1P2-201ENST00000520205 911 ntBASIC4.2□□□□□ -1.74
SDC3O75056 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.2□□□□□ -1.74
SDC3O75056 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.2□□□□□ -1.74
SDC3O75056 NF1P5-201ENST00000588287 448 ntBASIC4.2□□□□□ -1.74
SDC3O75056 AC115085.1-201ENST00000588924 229 ntBASIC4.2□□□□□ -1.74
SDC3O75056 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
SDC3O75056 AC006116.5-201ENST00000591936 559 ntBASIC4.2□□□□□ -1.74
SDC3O75056 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.2□□□□□ -1.74
SDC3O75056 KATNBL1P5-201ENST00000605015 517 ntBASIC4.2□□□□□ -1.74
SDC3O75056 AC234782.5-201ENST00000617723 324 ntBASIC4.2□□□□□ -1.74
SDC3O75056 AC090617.9-201ENST00000623751 147 ntBASIC4.2□□□□□ -1.74
SDC3O75056 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SDC3O75056 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SDC3O75056 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.2□□□□□ -1.74
SDC3O75056 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SDC3O75056 AL353743.4-201ENST00000422653 1547 ntBASIC4.2□□□□□ -1.74
SDC3O75056 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.2□□□□□ -1.74
SDC3O75056 MAPK10-303ENST00000641324 3959 ntBASIC4.2□□□□□ -1.74
SDC3O75056 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDC3O75056 AC100871.1-201ENST00000507871 1456 ntBASIC4.19□□□□□ -1.74
SDC3O75056 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDC3O75056 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDC3O75056 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDC3O75056 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDC3O75056 RNU1-108P-201ENST00000362556 161 ntBASIC4.19□□□□□ -1.74
SDC3O75056 RNU1-85P-201ENST00000364127 164 ntBASIC4.19□□□□□ -1.74
SDC3O75056 RNA5SP513-201ENST00000364648 118 ntBASIC4.19□□□□□ -1.74
SDC3O75056 RNA5SP151-201ENST00000365632 117 ntBASIC4.19□□□□□ -1.74
SDC3O75056 MIR554-201ENST00000384874 96 ntBASIC4.19□□□□□ -1.74
SDC3O75056 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.19□□□□□ -1.74
SDC3O75056 TAF9BP2-201ENST00000400856 499 ntBASIC4.19□□□□□ -1.74
SDC3O75056 RN7SKP202-201ENST00000410439 330 ntBASIC4.19□□□□□ -1.74
SDC3O75056 RN7SKP182-201ENST00000410772 298 ntBASIC4.19□□□□□ -1.74
SDC3O75056 RN7SKP33-201ENST00000410942 340 ntBASIC4.19□□□□□ -1.74
SDC3O75056 ARL2BPP3-201ENST00000421226 480 ntBASIC4.19□□□□□ -1.74
SDC3O75056 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SDC3O75056 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC3O75056 RPS29P7-201ENST00000439662 171 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.19□□□□□ -1.74
SDC3O75056 RPL21P89-201ENST00000444021 467 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AC133473.1-201ENST00000455173 299 ntBASIC4.19□□□□□ -1.74
SDC3O75056 MTND2P6-201ENST00000455337 1030 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AC010469.1-201ENST00000463864 576 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.19□□□□□ -1.74
SDC3O75056 RN7SL542P-201ENST00000467147 294 ntBASIC4.19□□□□□ -1.74
SDC3O75056 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC3O75056 SYT14P1-201ENST00000481459 721 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AC104687.1-201ENST00000485829 412 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AF213884.1-201ENST00000488102 463 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC3O75056 AC010285.3-201ENST00000511668 676 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC3O75056 AC108064.1-201ENST00000513791 460 ntBASIC4.19□□□□□ -1.74
SDC3O75056 SNORD116-26-201ENST00000516006 96 ntBASIC4.19□□□□□ -1.74
SDC3O75056 MTCO1P49-201ENST00000523429 802 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC3O75056 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SDC3O75056 AC004923.2-201ENST00000529649 369 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AP002812.4-201ENST00000532139 286 ntBASIC4.19□□□□□ -1.74
SDC3O75056 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC3O75056 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.19□□□□□ -1.74
SDC3O75056 AP003117.1-201ENST00000602771 554 ntBASIC4.19□□□□□ -1.74
SDC3O75056 AL450270.1-201ENST00000606160 391 ntBASIC4.19□□□□□ -1.74
SDC3O75056 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.19□□□□□ -1.74
SDC3O75056 RNU4-89P-201ENST00000607443 133 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms