Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.73□□□□□ -1.65
SMAD6O43541 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SMAD6O43541 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.73□□□□□ -1.65
SMAD6O43541 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.73□□□□□ -1.65
SMAD6O43541 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.73□□□□□ -1.65
SMAD6O43541 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SMAD6O43541 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
SMAD6O43541 AC104454.1-201ENST00000421341 1401 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
SMAD6O43541 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMAD6O43541 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.72□□□□□ -1.65
SMAD6O43541 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMAD6O43541 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMAD6O43541 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SMAD6O43541 AC021146.4-201ENST00000309229 279 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMAD6O43541 RNU6-146P-201ENST00000384602 108 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 RNU6-225P-201ENST00000384613 103 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SMAD6O43541 AP000580.1-201ENST00000404439 358 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AL008987.1-201ENST00000415528 237 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 USP9YP26-201ENST00000421008 661 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.72□□□□□ -1.65
SMAD6O43541 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.72□□□□□ -1.65
SMAD6O43541 RPL23AP1-201ENST00000428990 471 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 GTF2IP3-201ENST00000433887 494 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 ARL4AP3-201ENST00000441452 574 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.72□□□□□ -1.65
SMAD6O43541 MTND2P4-201ENST00000445034 1004 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 RPL6P5-201ENST00000445678 828 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 ARL2BPP10-201ENST00000446487 531 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.72□□□□□ -1.65
SMAD6O43541 IFNWP4-201ENST00000453148 294 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AC008280.2-201ENST00000455473 307 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 USP9YP25-201ENST00000457708 443 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.72□□□□□ -1.65
SMAD6O43541 MTND4LP3-201ENST00000468320 276 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.72□□□□□ -1.65
SMAD6O43541 RN7SL346P-201ENST00000491561 294 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AC025164.1-201ENST00000496249 478 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AC091951.3-201ENST00000504093 246 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.72□□□□□ -1.65
SMAD6O43541 AC034244.1-201ENST00000507687 207 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AC007016.1-201ENST00000512110 244 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.72□□□□□ -1.65
SMAD6O43541 RNA5SP360-201ENST00000516555 118 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.72□□□□□ -1.65
SMAD6O43541 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.72□□□□□ -1.65
SMAD6O43541 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.72□□□□□ -1.65
SMAD6O43541 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.72□□□□□ -1.65
SMAD6O43541 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.72□□□□□ -1.65
SMAD6O43541 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.72□□□□□ -1.65
SMAD6O43541 AC068714.1-201ENST00000559623 800 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AC090888.1-201ENST00000561335 1141 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.72□□□□□ -1.65
SMAD6O43541 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.72□□□□□ -1.65
SMAD6O43541 AC069366.1-201ENST00000583159 838 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.72□□□□□ -1.65
SMAD6O43541 DEFB131E-202ENST00000602581 683 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.72□□□□□ -1.65
SMAD6O43541 AC007349.4-201ENST00000608114 532 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.72□□□□□ -1.65
SMAD6O43541 AC011815.3-201ENST00000624194 473 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 AC098679.5-201ENST00000624394 571 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.72□□□□□ -1.65
SMAD6O43541 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SMAD6O43541 AL031119.1-201ENST00000404707 1879 ntBASIC4.72□□□□□ -1.65
SMAD6O43541 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMAD6O43541 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SMAD6O43541 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMAD6O43541 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMAD6O43541 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMAD6O43541 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.72□□□□□ -1.65
SMAD6O43541 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SMAD6O43541 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SMAD6O43541 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.65
SMAD6O43541 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SMAD6O43541 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SMAD6O43541 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SMAD6O43541 MTND4P26-201ENST00000415971 1359 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.71□□□□□ -1.66
SMAD6O43541 RNU1-32P-201ENST00000363937 159 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.71□□□□□ -1.66
SMAD6O43541 RPS4XP9-201ENST00000405151 780 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 FAR2P2-201ENST00000413041 594 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SMAD6O43541 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.71□□□□□ -1.66
SMAD6O43541 RPS3AP37-201ENST00000419176 745 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 AL513175.2-201ENST00000422071 443 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 FAR2P4-202ENST00000425399 584 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 RPEP3-201ENST00000425462 676 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 RPS3AP44-201ENST00000425466 790 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 CENPIP1-201ENST00000425713 902 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.71□□□□□ -1.66
SMAD6O43541 AL035407.1-201ENST00000429211 571 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.71□□□□□ -1.66
SMAD6O43541 AL008629.1-201ENST00000438615 184 ntBASIC4.71□□□□□ -1.66
SMAD6O43541 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms