Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC188H7C350 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC188H7C350 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC188H7C350 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC188H7C350 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC188H7C350 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC188H7C350 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC188H7C350 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC188H7C350 U6.112-201ENST00000384129 70 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 SNORA51.12-201ENST00000384448 134 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC188H7C350 RNU2-65P-201ENST00000410162 185 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 MTND2P15-201ENST00000418575 892 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 AC092647.1-201ENST00000420654 287 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC188H7C350 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC188H7C350 AC105402.2-201ENST00000438503 358 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 FGF7P3-201ENST00000454645 303 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC188H7C350 AC010374.1-201ENST00000503762 1237 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC188H7C350 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC188H7C350 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC188H7C350 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC188H7C350 OR5BC1P-201ENST00000529327 739 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC188H7C350 CYB5AP5-201ENST00000549779 389 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC188H7C350 HMGB3P26-201ENST00000560051 582 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC188H7C350 AL021997.2-201ENST00000615674 271 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 MIR7155-201ENST00000615925 56 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC188H7C350 LINC00901.1-201ENST00000617252 152 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 AC018926.3-201ENST00000618841 406 ntBASIC4.47□□□□□ -1.69
CCDC188H7C350 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC188H7C350 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC188H7C350 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CCDC188H7C350 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC188H7C350 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CCDC188H7C350 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC188H7C350 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC188H7C350 AL049555.1-201ENST00000562834 1933 ntBASIC4.46□□□□□ -1.69
CCDC188H7C350 ZNF962P-201ENST00000443465 3140 ntBASIC4.46□□□□□ -1.69
CCDC188H7C350 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CCDC188H7C350 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC188H7C350 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC188H7C350 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC188H7C350 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC188H7C350 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC188H7C350 RNA5SP391-201ENST00000363456 119 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 RNA5SP175-201ENST00000364275 119 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC188H7C350 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC188H7C350 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC188H7C350 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC188H7C350 MIR1179-201ENST00000408703 91 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 SNORA3C-201ENST00000408792 125 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC188H7C350 FO393414.1-201ENST00000428697 1184 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC188H7C350 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC188H7C350 CEACAMP1-201ENST00000434624 1035 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC188H7C350 AC009263.1-201ENST00000441193 1239 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 AC092809.1-201ENST00000441469 474 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 RPS26P30-201ENST00000443431 335 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC188H7C350 AC233982.1-201ENST00000451247 436 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 HMGB3P22-202ENST00000451823 572 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC188H7C350 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC188H7C350 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC188H7C350 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC188H7C350 IGKV1-32-201ENST00000519290 311 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC188H7C350 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC188H7C350 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC188H7C350 CYP2C60P-201ENST00000566088 139 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 UBE2FP2-201ENST00000566646 462 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 HNRNPCP4-201ENST00000571636 900 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 DNAJC19P3-201ENST00000594491 331 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 AP001160.4-201ENST00000596971 382 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 AP002906.1-201ENST00000603405 233 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC188H7C350 AC243756.2-201ENST00000618406 463 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 AC093875.1-201ENST00000623688 504 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.46□□□□□ -1.7
CCDC188H7C350 BMS1P21-201ENST00000634565 365 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC188H7C350 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
CCDC188H7C350 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.46□□□□□ -1.7
CCDC188H7C350 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC188H7C350 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC188H7C350 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC188H7C350 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC188H7C350 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC188H7C350 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC188H7C350 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms