Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL009174.1-201ENST00000426577 416 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AC012497.1-201ENST00000429392 575 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AL138878.2-201ENST00000440581 1241 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 ARL2BPP10-201ENST00000446487 531 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 RPS27AP17-201ENST00000463344 455 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 RPL21P126-201ENST00000470049 478 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AC093720.1-201ENST00000505681 714 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AF279873.1-201ENST00000523393 313 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AC006518.2-201ENST00000542513 940 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 GSTP1P1-201ENST00000548078 319 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 RPL12P25-202ENST00000598100 674 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AP002802.2-201ENST00000605877 235 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 RNU6-1192P-201ENST00000612197 107 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 RNU6-489P-201ENST00000618289 107 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AC007546.2-201ENST00000623996 360 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 AL627171.1-201ENST00000618845 1308 ntBASIC4.96□□□□□ -1.62
BLOC1S4Q9NUP1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 MAPK10-286ENST00000641208 8747 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC008033.1-201ENST00000216407 1162 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 RNU6-984P-201ENST00000363236 109 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 RNU1-44P-201ENST00000384453 163 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 MIR192-201ENST00000384915 110 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 RPS3AP23-201ENST00000401762 784 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AL645931.1-201ENST00000439737 410 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AL162388.1-201ENST00000450912 352 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 DHFRP3-201ENST00000455595 559 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 RPL5P30-201ENST00000465511 891 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC090071.1-201ENST00000507713 644 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC119751.1-201ENST00000513357 765 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC104115.2-201ENST00000523026 687 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 PTP4A1P6-201ENST00000531034 478 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AP000346.3-201ENST00000622821 210 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 AC120338.1-201ENST00000625074 1541 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 DCAF13P3-201ENST00000561147 1334 ntBASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.95□□□□□ -1.62
BLOC1S4Q9NUP1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC007390.2-201ENST00000606229 3803 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AC105074.1-201ENST00000623380 3095 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 RNA5SP372-201ENST00000390836 115 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 AL078604.1-201ENST00000404609 466 ntBASIC4.94□□□□□ -1.62
BLOC1S4Q9NUP1 CEACAMP8-201ENST00000413902 580 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms