Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL390334.1-201ENST00000556395 450 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AC106782.4-201ENST00000568264 210 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 ELOCP35-201ENST00000604289 336 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AC005000.2-201ENST00000605468 310 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AC073530.2-201ENST00000623987 261 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 RNA5SP72-201ENST00000364442 117 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AL451050.1-201ENST00000450126 415 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AC084759.1-201ENST00000561168 290 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AL049634.3-201ENST00000604968 457 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AL078595.2-201ENST00000605309 1780 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 PTMAP5-201ENST00000393073 333 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 USP12PY-201ENST00000427677 1064 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AP000907.1-201ENST00000428428 510 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AL358832.1-201ENST00000497800 389 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 HSPD1P15-201ENST00000505573 1122 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 SCARNA14-201ENST00000516903 136 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AC024224.1-201ENST00000538284 609 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 MIMT1-201ENST00000597105 1050 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 LINC01355-201ENST00000566551 5444 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AC000123.3-201ENST00000624029 4975 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 NACAP7-201ENST00000407371 609 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 SULT1C2P2-201ENST00000562517 294 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 KC877982.1-201ENST00000602313 470 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 MIR486-1-201ENST00000612171 68 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AC243654.2-201ENST00000612843 443 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 MIR7975-201ENST00000619350 68 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 AC079298.2-201ENST00000623885 459 ntBASIC3.93□□□□□ -1.78
SHROOM3Q8TF72 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 ZNF833P-201ENST00000424938 1494 ntBASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 U1.1-201ENST00000384101 164 ntBASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 HMGB1P16-201ENST00000447155 540 ntBASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 AC115115.1-201ENST00000449927 248 ntBASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 AC098824.1-201ENST00000453565 980 ntBASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 MTND6P6-201ENST00000478031 263 ntBASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 FCF1P3-201ENST00000496394 590 ntBASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 RPL23AP94-201ENST00000512518 302 ntBASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 RNA5SP208-201ENST00000516156 78 ntBASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 DPRXP4-201ENST00000578053 568 ntBASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 AL390816.3-201ENST00000604527 1066 ntBASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 AC135507.2-201ENST00000612443 309 ntBASIC3.92□□□□□ -1.78
SHROOM3Q8TF72 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 MIR183-201ENST00000384958 110 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 RNA5SP104-201ENST00000410989 118 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 RPL7AP73-201ENST00000413490 353 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 OR51A6P-201ENST00000418680 1004 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms