Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC012075.1-201ENST00000436549 580 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 DHFRP3-201ENST00000455595 559 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 KHDC1P1-201ENST00000511053 508 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AC021146.1-201ENST00000511202 716 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 CYCSP22-201ENST00000517555 339 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 PCNAP4-201ENST00000532690 730 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 OR5B10P-201ENST00000532869 642 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AC018552.3-201ENST00000567416 561 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 MIR378J-201ENST00000611988 109 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AP001784.1-201ENST00000624107 428 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 Y_RNA.28-201ENST00000362554 111 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 Y_RNA.301-201ENST00000364990 103 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 METTL15P3-201ENST00000415522 1221 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AC130360.1-201ENST00000425489 1117 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AL954705.1-201ENST00000435277 559 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 PRPF38AP2-201ENST00000438179 851 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 RNU7-152P-201ENST00000458982 64 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 RN7SL30P-201ENST00000488416 306 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 PTP4A1P4-201ENST00000512479 322 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AC130365.2-201ENST00000525882 1201 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 CYCSP28-201ENST00000534284 321 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 HMGN2P6-201ENST00000551091 273 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 GLUD1P4-201ENST00000590914 418 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AL008723.3-201ENST00000608926 449 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 OR6R2P-201ENST00000609216 300 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AL512652.1-201ENST00000619006 500 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 OR1N1-202ENST00000619659 939 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 uc_338.22-201ENST00000622722 187 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AC107081.3-201ENST00000612715 2034 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 AC123769.2-201ENST00000624332 5984 ntBASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PRPF38BQ5VTL8 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 MTND5P33-201ENST00000571250 1450 ntBASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 RNA5SP110-201ENST00000362638 115 ntBASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 RNU5E-8P-201ENST00000363502 116 ntBASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 CYCSP17-201ENST00000407870 315 ntBASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 MIR548F5-201ENST00000408421 86 ntBASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 RN7SKP121-201ENST00000410842 305 ntBASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 RNU6-370P-201ENST00000411008 104 ntBASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 AC093155.2-201ENST00000420734 937 ntBASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 AC005517.2-201ENST00000424673 553 ntBASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 AC093156.1-201ENST00000440382 670 ntBASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 CEACAMP9-201ENST00000442990 513 ntBASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC7.12□□□□□ -1.27
PRPF38BQ5VTL8 RPL32P28-201ENST00000443577 397 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms