Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CASQ1P31415 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CASQ1P31415 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.33□□□□□ -1.72
CASQ1P31415 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.33□□□□□ -1.72
CASQ1P31415 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CASQ1P31415 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
CASQ1P31415 MFSD8-216ENST00000641147 4009 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CASQ1P31415 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CASQ1P31415 HMGB1P13-201ENST00000406019 642 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.33□□□□□ -1.72
CASQ1P31415 AC007064.3-201ENST00000422608 359 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.33□□□□□ -1.72
CASQ1P31415 UBE2V2P1-201ENST00000434717 398 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 RPL23AP46-201ENST00000438548 490 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.33□□□□□ -1.72
CASQ1P31415 AC092809.1-201ENST00000441469 474 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 AC245517.2-201ENST00000442890 346 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 RPL31P44-201ENST00000447680 377 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 HMGB3P8-201ENST00000449709 577 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 AC009963.2-201ENST00000453431 138 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 RN7SL101P-201ENST00000496350 279 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.33□□□□□ -1.72
CASQ1P31415 PTGES3P3-201ENST00000511479 482 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 RN7SKP234-201ENST00000517173 224 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 SOD1P3-201ENST00000518682 454 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CASQ1P31415 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.33□□□□□ -1.72
CASQ1P31415 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CASQ1P31415 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.33□□□□□ -1.72
CASQ1P31415 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.33□□□□□ -1.72
CASQ1P31415 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.33□□□□□ -1.72
CASQ1P31415 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.33□□□□□ -1.72
CASQ1P31415 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.33□□□□□ -1.72
CASQ1P31415 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CASQ1P31415 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.33□□□□□ -1.72
CASQ1P31415 XIST_intron.1-201ENST00000619444 68 ntBASIC4.33□□□□□ -1.72
CASQ1P31415 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.33□□□□□ -1.72
CASQ1P31415 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.33□□□□□ -1.72
CASQ1P31415 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CASQ1P31415 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
CASQ1P31415 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.33□□□□□ -1.72
CASQ1P31415 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CASQ1P31415 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CASQ1P31415 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.32□□□□□ -1.72
CASQ1P31415 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.32□□□□□ -1.72
CASQ1P31415 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CASQ1P31415 RNU1-14P-201ENST00000362759 152 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 RNU6-317P-201ENST00000384031 107 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 ATP5F1P4-201ENST00000397288 746 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 MTHFD2P2-201ENST00000407725 247 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 MIR1251-201ENST00000408552 70 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 CHIAP3-201ENST00000423668 1133 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 HMGB1P32-201ENST00000425971 565 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.32□□□□□ -1.72
CASQ1P31415 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.32□□□□□ -1.72
CASQ1P31415 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.32□□□□□ -1.72
CASQ1P31415 VN1R48P-201ENST00000448149 1036 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.32□□□□□ -1.72
CASQ1P31415 MTND2P8-201ENST00000450555 1025 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CASQ1P31415 MTCO3P16-201ENST00000454456 754 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 DNAJC19P1-201ENST00000455312 319 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 AC104629.2-201ENST00000468627 598 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 AF213884.1-201ENST00000488102 463 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.32□□□□□ -1.72
CASQ1P31415 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.32□□□□□ -1.72
CASQ1P31415 KRT19P6-201ENST00000510983 209 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CASQ1P31415 ACTR6P1-201ENST00000514311 1104 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 RNA5SP34-201ENST00000516887 130 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 PDCL2P2-201ENST00000533651 189 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 HMGN2P6-201ENST00000551091 273 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.32□□□□□ -1.72
CASQ1P31415 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CASQ1P31415 AP005212.4-201ENST00000614206 710 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CASQ1P31415 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.32□□□□□ -1.72
CASQ1P31415 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CASQ1P31415 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CASQ1P31415 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CASQ1P31415 C4BPAP1-201ENST00000415474 1893 ntBASIC4.32□□□□□ -1.72
CASQ1P31415 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.32□□□□□ -1.72
CASQ1P31415 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
CASQ1P31415 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CASQ1P31415 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.31□□□□□ -1.72
CASQ1P31415 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CASQ1P31415 RNA5SP507-201ENST00000363603 121 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CASQ1P31415 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CASQ1P31415 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CASQ1P31415 AC069218.2-201ENST00000411665 344 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CASQ1P31415 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CASQ1P31415 RPL36AP15-201ENST00000444514 266 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.31□□□□□ -1.72
CASQ1P31415 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.31□□□□□ -1.72
CASQ1P31415 AC010326.1-201ENST00000462726 602 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 RPL29P14-201ENST00000495837 428 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms