Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RB1P06400 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RB1P06400 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RB1P06400 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RB1P06400 AC011155.1-201ENST00000316512 456 ntBASIC4.83□□□□□ -1.64
RB1P06400 MIR383-201ENST00000362257 73 ntBASIC4.83□□□□□ -1.64
RB1P06400 RNU1-132P-201ENST00000364300 164 ntBASIC4.83□□□□□ -1.64
RB1P06400 SNORD65C-201ENST00000390962 71 ntBASIC4.83□□□□□ -1.64
RB1P06400 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.83□□□□□ -1.64
RB1P06400 DNAJC19P6-201ENST00000401853 280 ntBASIC4.83□□□□□ -1.64
RB1P06400 ARL4AP5-201ENST00000404372 599 ntBASIC4.83□□□□□ -1.64
RB1P06400 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.83□□□□□ -1.64
RB1P06400 RNU6-628P-201ENST00000410675 107 ntBASIC4.83□□□□□ -1.64
RB1P06400 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.83□□□□□ -1.64
RB1P06400 CEACAMP8-201ENST00000413902 580 ntBASIC4.83□□□□□ -1.64
RB1P06400 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.83□□□□□ -1.64
RB1P06400 RPL23AP38-201ENST00000423801 469 ntBASIC4.83□□□□□ -1.64
RB1P06400 FABP5P3-201ENST00000437960 408 ntBASIC4.83□□□□□ -1.64
RB1P06400 YWHAQP9-201ENST00000445891 512 ntBASIC4.83□□□□□ -1.64
RB1P06400 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.83□□□□□ -1.64
RB1P06400 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.83□□□□□ -1.64
RB1P06400 AC041039.1-201ENST00000485656 536 ntBASIC4.83□□□□□ -1.64
RB1P06400 AL035404.1-201ENST00000497982 568 ntBASIC4.83□□□□□ -1.64
RB1P06400 AC119751.4-201ENST00000507498 357 ntBASIC4.83□□□□□ -1.64
RB1P06400 AC104108.1-201ENST00000509930 412 ntBASIC4.83□□□□□ -1.64
RB1P06400 MTCO1P49-201ENST00000523429 802 ntBASIC4.83□□□□□ -1.64
RB1P06400 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.83□□□□□ -1.64
RB1P06400 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.83□□□□□ -1.64
RB1P06400 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.83□□□□□ -1.64
RB1P06400 AP000919.1-202ENST00000581139 1264 ntBASIC4.83□□□□□ -1.64
RB1P06400 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.83□□□□□ -1.64
RB1P06400 OR1AB1P-201ENST00000585564 761 ntBASIC4.83□□□□□ -1.64
RB1P06400 AC113403.1-201ENST00000604910 193 ntBASIC4.83□□□□□ -1.64
RB1P06400 AL355816.1-201ENST00000607951 118 ntBASIC4.83□□□□□ -1.64
RB1P06400 uc_338.13-201ENST00000618243 179 ntBASIC4.83□□□□□ -1.64
RB1P06400 AC126544.2-201ENST00000625174 749 ntBASIC4.83□□□□□ -1.64
RB1P06400 ATE1-AS1-202ENST00000636460 506 ntBASIC4.83□□□□□ -1.64
RB1P06400 AL590396.2-201ENST00000636511 1041 ntBASIC4.83□□□□□ -1.64
RB1P06400 OR2L1P-202ENST00000641567 1023 ntBASIC4.83□□□□□ -1.64
RB1P06400 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RB1P06400 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RB1P06400 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.83□□□□□ -1.64
RB1P06400 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RB1P06400 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RB1P06400 AC100778.3-201ENST00000580060 1750 ntBASIC4.83□□□□□ -1.64
RB1P06400 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RB1P06400 DHX9P1-201ENST00000436565 3076 ntBASIC4.83□□□□□ -1.64
RB1P06400 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RB1P06400 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RB1P06400 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RB1P06400 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.82□□□□□ -1.64
RB1P06400 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RB1P06400 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RB1P06400 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
RB1P06400 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
RB1P06400 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RB1P06400 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RB1P06400 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RB1P06400 RNU1-130P-201ENST00000363930 160 ntBASIC4.82□□□□□ -1.64
RB1P06400 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RB1P06400 SNORA11F-201ENST00000408237 128 ntBASIC4.82□□□□□ -1.64
RB1P06400 E2F6P2-201ENST00000420708 748 ntBASIC4.82□□□□□ -1.64
RB1P06400 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.82□□□□□ -1.64
RB1P06400 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.82□□□□□ -1.64
RB1P06400 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.82□□□□□ -1.64
RB1P06400 ARF4P4-201ENST00000439608 520 ntBASIC4.82□□□□□ -1.64
RB1P06400 AC000041.1-201ENST00000439655 175 ntBASIC4.82□□□□□ -1.64
RB1P06400 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.82□□□□□ -1.64
RB1P06400 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RB1P06400 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.82□□□□□ -1.64
RB1P06400 AC008280.2-201ENST00000455473 307 ntBASIC4.82□□□□□ -1.64
RB1P06400 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.82□□□□□ -1.64
RB1P06400 PGBD4P4-201ENST00000509673 613 ntBASIC4.82□□□□□ -1.64
RB1P06400 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.82□□□□□ -1.64
RB1P06400 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.82□□□□□ -1.64
RB1P06400 HMGB1P1-201ENST00000522557 636 ntBASIC4.82□□□□□ -1.64
RB1P06400 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RB1P06400 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.82□□□□□ -1.64
RB1P06400 AC068446.3-201ENST00000555285 382 ntBASIC4.82□□□□□ -1.64
RB1P06400 AC090515.3-201ENST00000560431 315 ntBASIC4.82□□□□□ -1.64
RB1P06400 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.82□□□□□ -1.64
RB1P06400 AC090751.1-201ENST00000566966 267 ntBASIC4.82□□□□□ -1.64
RB1P06400 MIR4429-201ENST00000580105 73 ntBASIC4.82□□□□□ -1.64
RB1P06400 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.82□□□□□ -1.64
RB1P06400 EIF1P6-201ENST00000600054 334 ntBASIC4.82□□□□□ -1.64
RB1P06400 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RB1P06400 AC099785.1-201ENST00000605697 437 ntBASIC4.82□□□□□ -1.64
RB1P06400 AC112503.1-201ENST00000608436 391 ntBASIC4.82□□□□□ -1.64
RB1P06400 AL512427.1-201ENST00000618593 349 ntBASIC4.82□□□□□ -1.64
RB1P06400 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.82□□□□□ -1.64
RB1P06400 AC009269.6-201ENST00000621778 588 ntBASIC4.82□□□□□ -1.64
RB1P06400 CR392039.4-201ENST00000624968 501 ntBASIC4.82□□□□□ -1.64
RB1P06400 AC004808.1-201ENST00000627671 721 ntBASIC4.82□□□□□ -1.64
RB1P06400 BMS1P21-201ENST00000634565 365 ntBASIC4.82□□□□□ -1.64
RB1P06400 AL356118.1-201ENST00000635272 1078 ntBASIC4.82□□□□□ -1.64
RB1P06400 THAP12P5-201ENST00000405864 2275 ntBASIC4.82□□□□□ -1.64
RB1P06400 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RB1P06400 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RB1P06400 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
RB1P06400 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms