Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TIMP1P01033 PRO1804-201ENST00000623780 2050 ntBASIC4.3□□□□□ -1.72
TIMP1P01033 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
TIMP1P01033 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
TIMP1P01033 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
TIMP1P01033 SETP15-201ENST00000412724 337 ntBASIC4.3□□□□□ -1.72
TIMP1P01033 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.3□□□□□ -1.72
TIMP1P01033 AC245052.5-201ENST00000416320 649 ntBASIC4.3□□□□□ -1.72
TIMP1P01033 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.3□□□□□ -1.72
TIMP1P01033 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.3□□□□□ -1.72
TIMP1P01033 RPL21P11-201ENST00000461458 483 ntBASIC4.3□□□□□ -1.72
TIMP1P01033 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.3□□□□□ -1.72
TIMP1P01033 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.3□□□□□ -1.72
TIMP1P01033 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.3□□□□□ -1.72
TIMP1P01033 RN7SKP18-201ENST00000516005 275 ntBASIC4.3□□□□□ -1.72
TIMP1P01033 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.3□□□□□ -1.72
TIMP1P01033 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.3□□□□□ -1.72
TIMP1P01033 MTND1P6-201ENST00000523621 946 ntBASIC4.3□□□□□ -1.72
TIMP1P01033 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.3□□□□□ -1.72
TIMP1P01033 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TIMP1P01033 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.3□□□□□ -1.72
TIMP1P01033 AC093591.2-201ENST00000565254 3843 ntBASIC4.3□□□□□ -1.72
TIMP1P01033 MIR5187-201ENST00000583479 76 ntBASIC4.3□□□□□ -1.72
TIMP1P01033 AC245128.3-201ENST00000594721 748 ntBASIC4.3□□□□□ -1.72
TIMP1P01033 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TIMP1P01033 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TIMP1P01033 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TIMP1P01033 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TIMP1P01033 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TIMP1P01033 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TIMP1P01033 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TIMP1P01033 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
TIMP1P01033 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TIMP1P01033 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.29□□□□□ -1.72
TIMP1P01033 EOGT-210ENST00000615922 1931 ntBASIC4.29□□□□□ -1.72
TIMP1P01033 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
TIMP1P01033 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TIMP1P01033 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TIMP1P01033 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TIMP1P01033 NPM1P10-201ENST00000398310 865 ntBASIC4.29□□□□□ -1.72
TIMP1P01033 RPS7P15-201ENST00000415804 584 ntBASIC4.29□□□□□ -1.72
TIMP1P01033 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.29□□□□□ -1.72
TIMP1P01033 HSPE1P16-201ENST00000426640 348 ntBASIC4.29□□□□□ -1.72
TIMP1P01033 HIGD1AP4-201ENST00000430194 280 ntBASIC4.29□□□□□ -1.72
TIMP1P01033 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.29□□□□□ -1.72
TIMP1P01033 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TIMP1P01033 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.29□□□□□ -1.72
TIMP1P01033 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.29□□□□□ -1.72
TIMP1P01033 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TIMP1P01033 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.29□□□□□ -1.72
TIMP1P01033 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.29□□□□□ -1.72
TIMP1P01033 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.29□□□□□ -1.72
TIMP1P01033 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.29□□□□□ -1.72
TIMP1P01033 AC107918.3-201ENST00000533272 382 ntBASIC4.29□□□□□ -1.72
TIMP1P01033 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.29□□□□□ -1.72
TIMP1P01033 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.29□□□□□ -1.72
TIMP1P01033 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.29□□□□□ -1.72
TIMP1P01033 SETP1-201ENST00000556014 845 ntBASIC4.29□□□□□ -1.72
TIMP1P01033 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
TIMP1P01033 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TIMP1P01033 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.29□□□□□ -1.72
TIMP1P01033 AL139089.1-201ENST00000620372 975 ntBASIC4.29□□□□□ -1.72
TIMP1P01033 MIR7702-201ENST00000621931 59 ntBASIC4.29□□□□□ -1.72
TIMP1P01033 AC073530.2-201ENST00000623987 261 ntBASIC4.29□□□□□ -1.72
TIMP1P01033 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TIMP1P01033 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TIMP1P01033 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TIMP1P01033 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
TIMP1P01033 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TIMP1P01033 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.28□□□□□ -1.72
TIMP1P01033 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.28□□□□□ -1.72
TIMP1P01033 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.28□□□□□ -1.72
TIMP1P01033 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TIMP1P01033 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TIMP1P01033 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TIMP1P01033 DHFRP5-201ENST00000406944 564 ntBASIC4.28□□□□□ -1.72
TIMP1P01033 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.28□□□□□ -1.72
TIMP1P01033 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.28□□□□□ -1.72
TIMP1P01033 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.28□□□□□ -1.72
TIMP1P01033 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.28□□□□□ -1.72
TIMP1P01033 Z85994.2-201ENST00000434327 452 ntBASIC4.28□□□□□ -1.72
TIMP1P01033 EIF4A1P11-201ENST00000451239 222 ntBASIC4.28□□□□□ -1.72
TIMP1P01033 APOOP2-201ENST00000461561 539 ntBASIC4.28□□□□□ -1.72
TIMP1P01033 AC112206.1-201ENST00000468416 477 ntBASIC4.28□□□□□ -1.72
TIMP1P01033 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.28□□□□□ -1.72
TIMP1P01033 RN7SL809P-201ENST00000482040 297 ntBASIC4.28□□□□□ -1.72
TIMP1P01033 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
TIMP1P01033 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.28□□□□□ -1.72
TIMP1P01033 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.28□□□□□ -1.72
TIMP1P01033 RNU6-362P-201ENST00000516736 90 ntBASIC4.28□□□□□ -1.72
TIMP1P01033 OR5B10P-201ENST00000532869 642 ntBASIC4.28□□□□□ -1.72
TIMP1P01033 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.28□□□□□ -1.72
TIMP1P01033 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.28□□□□□ -1.72
TIMP1P01033 AC008759.1-201ENST00000589783 983 ntBASIC4.28□□□□□ -1.72
TIMP1P01033 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.28□□□□□ -1.72
TIMP1P01033 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.28□□□□□ -1.72
TIMP1P01033 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TIMP1P01033 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TIMP1P01033 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.28□□□□□ -1.72
TIMP1P01033 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms