Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 RN7SKP113-201ENST00000363891 295 ntBASIC4.3□□□□□ -1.72
SSX4O60224 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 RNA5SP87-201ENST00000384155 118 ntBASIC4.3□□□□□ -1.72
SSX4O60224 MIR16-1-201ENST00000385271 89 ntBASIC4.3□□□□□ -1.72
SSX4O60224 ATP5F1P2-201ENST00000398143 760 ntBASIC4.3□□□□□ -1.72
SSX4O60224 MTCO2P31-201ENST00000402702 684 ntBASIC4.3□□□□□ -1.72
SSX4O60224 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 RNU6-575P-201ENST00000411326 105 ntBASIC4.3□□□□□ -1.72
SSX4O60224 AL160275.2-201ENST00000412010 394 ntBASIC4.3□□□□□ -1.72
SSX4O60224 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX4O60224 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX4O60224 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX4O60224 AC019050.1-201ENST00000418508 492 ntBASIC4.3□□□□□ -1.72
SSX4O60224 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX4O60224 PAICSP7-201ENST00000419829 962 ntBASIC4.3□□□□□ -1.72
SSX4O60224 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX4O60224 AL031736.2-201ENST00000426573 787 ntBASIC4.3□□□□□ -1.72
SSX4O60224 AL158073.1-201ENST00000426848 1104 ntBASIC4.3□□□□□ -1.72
SSX4O60224 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX4O60224 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX4O60224 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX4O60224 AC004865.1-201ENST00000442276 1003 ntBASIC4.3□□□□□ -1.72
SSX4O60224 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX4O60224 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX4O60224 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX4O60224 RN7SL443P-201ENST00000464331 290 ntBASIC4.3□□□□□ -1.72
SSX4O60224 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.3□□□□□ -1.72
SSX4O60224 AC010350.1-201ENST00000504908 231 ntBASIC4.3□□□□□ -1.72
SSX4O60224 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX4O60224 AC118282.2-201ENST00000508739 374 ntBASIC4.3□□□□□ -1.72
SSX4O60224 AC034205.1-201ENST00000520621 638 ntBASIC4.3□□□□□ -1.72
SSX4O60224 IGLV3-26-201ENST00000520756 302 ntBASIC4.3□□□□□ -1.72
SSX4O60224 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX4O60224 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX4O60224 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX4O60224 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX4O60224 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX4O60224 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX4O60224 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.3□□□□□ -1.72
SSX4O60224 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.3□□□□□ -1.72
SSX4O60224 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX4O60224 OR4U1P-201ENST00000554958 912 ntBASIC4.3□□□□□ -1.72
SSX4O60224 AL132857.1-201ENST00000555180 708 ntBASIC4.3□□□□□ -1.72
SSX4O60224 NDUFB4P11-201ENST00000560510 395 ntBASIC4.3□□□□□ -1.72
SSX4O60224 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.3□□□□□ -1.72
SSX4O60224 ATP5J2P6-201ENST00000565203 266 ntBASIC4.3□□□□□ -1.72
SSX4O60224 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX4O60224 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX4O60224 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX4O60224 AC009318.3-201ENST00000616916 503 ntBASIC4.3□□□□□ -1.72
SSX4O60224 AC068787.1-201ENST00000623908 691 ntBASIC4.3□□□□□ -1.72
SSX4O60224 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX4O60224 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX4O60224 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX4O60224 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX4O60224 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX4O60224 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX4O60224 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX4O60224 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX4O60224 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX4O60224 DDX18P5-201ENST00000534547 1306 ntBASIC4.29□□□□□ -1.72
SSX4O60224 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX4O60224 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX4O60224 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSX4O60224 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
SSX4O60224 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SSX4O60224 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX4O60224 AL021331.1-201ENST00000402817 582 ntBASIC4.29□□□□□ -1.72
SSX4O60224 SFR1P1-201ENST00000403720 688 ntBASIC4.29□□□□□ -1.72
SSX4O60224 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX4O60224 RNU6-272P-201ENST00000411028 104 ntBASIC4.29□□□□□ -1.72
SSX4O60224 OR51A3P-201ENST00000413596 924 ntBASIC4.29□□□□□ -1.72
SSX4O60224 MTATP6P20-201ENST00000414147 562 ntBASIC4.29□□□□□ -1.72
SSX4O60224 PRELID3BP11-201ENST00000414230 479 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX4O60224 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSX4O60224 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX4O60224 MTCO2P17-201ENST00000424336 677 ntBASIC4.29□□□□□ -1.72
SSX4O60224 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.29□□□□□ -1.72
SSX4O60224 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX4O60224 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX4O60224 AC093414.1-201ENST00000434712 514 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSX4O60224 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX4O60224 AC233982.1-201ENST00000451247 436 ntBASIC4.29□□□□□ -1.72
SSX4O60224 NDUFA12P1-201ENST00000455914 406 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX4O60224 AC096992.1-201ENST00000459808 709 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC010469.1-201ENST00000463864 576 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC104971.1-201ENST00000495117 578 ntBASIC4.29□□□□□ -1.72
SSX4O60224 RPL30P11-201ENST00000495304 339 ntBASIC4.29□□□□□ -1.72
SSX4O60224 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms