Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.19□□□□□ -1.26
HOXA2O43364 AC074141.1-201ENST00000588129 2995 ntBASIC7.19□□□□□ -1.26
HOXA2O43364 TAB3P1-202ENST00000452645 1634 ntBASIC7.19□□□□□ -1.26
HOXA2O43364 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HOXA2O43364 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
HOXA2O43364 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.19□□□□□ -1.26
HOXA2O43364 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.18□□□□□ -1.26
HOXA2O43364 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 AC008555.1-201ENST00000561778 2757 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
HOXA2O43364 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
HOXA2O43364 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 AL078604.1-201ENST00000404609 466 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 RPS4XP9-201ENST00000405151 780 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 RNA5SP198-201ENST00000410376 127 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC7.18□□□□□ -1.26
HOXA2O43364 AC012075.1-201ENST00000436549 580 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 CEACAMP4-201ENST00000457676 421 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 RPS29P15-201ENST00000458329 171 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 MIR2053-201ENST00000459295 91 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 RN7SL552P-201ENST00000462094 276 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 RPL7L1P8-201ENST00000469911 741 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.18□□□□□ -1.26
HOXA2O43364 RNU6-566P-201ENST00000516790 107 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 MYL12AP1-201ENST00000518490 515 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 CYCSP25-201ENST00000525280 316 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.18□□□□□ -1.26
HOXA2O43364 MTCO3P23-201ENST00000561363 289 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 OR1E3-201ENST00000575608 948 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC7.18□□□□□ -1.26
HOXA2O43364 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC7.18□□□□□ -1.26
HOXA2O43364 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.18□□□□□ -1.26
HOXA2O43364 MIR6071-201ENST00000616741 78 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 MIR6721-201ENST00000617181 87 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 U1.41-201ENST00000617626 165 ntBASIC7.18□□□□□ -1.26
HOXA2O43364 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.18□□□□□ -1.26
HOXA2O43364 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.18□□□□□ -1.26
HOXA2O43364 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.18□□□□□ -1.26
HOXA2O43364 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
HOXA2O43364 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.18□□□□□ -1.26
HOXA2O43364 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXA2O43364 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA2O43364 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA2O43364 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA2O43364 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXA2O43364 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXA2O43364 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 RPL32P3-201ENST00000359025 275 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 RNU5E-8P-201ENST00000363502 116 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 MIR199B-201ENST00000384849 110 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 RNU6-903P-201ENST00000391270 109 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 RNA5SP115-201ENST00000411160 107 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 HMGB3P2-201ENST00000411913 584 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 AL359092.1-201ENST00000417156 265 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXA2O43364 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 AC022022.1-201ENST00000430304 178 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXA2O43364 FABP5P14-201ENST00000437273 393 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 POU5F1P5-201ENST00000445059 658 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXA2O43364 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 MTCO3P10-201ENST00000455912 772 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 RNU7-182P-201ENST00000459009 62 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXA2O43364 AC022415.1-202ENST00000486612 523 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXA2O43364 AL049874.2-201ENST00000492636 288 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 LIAS-206ENST00000513731 826 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 SNORA25.10-201ENST00000515926 124 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXA2O43364 SOD1P3-201ENST00000518682 454 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXA2O43364 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.17□□□□□ -1.26
HOXA2O43364 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXA2O43364 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXA2O43364 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXA2O43364 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.17□□□□□ -1.26
HOXA2O43364 AC002310.3-201ENST00000569728 723 ntBASIC7.17□□□□□ -1.26
HOXA2O43364 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXA2O43364 SMIM12P1-201ENST00000603004 274 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms