Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC007731.2-201ENST00000426448 1703 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 TNFRSF11B-201ENST00000297350 2402 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MRPL27-202ENST00000442592 2441 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 CD302-202ENST00000429078 3803 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 FKBP5-204ENST00000542713 7384 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 TSGA10-203ENST00000393483 3878 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 PGAP2-225ENST00000493547 1772 ntTSL 3 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 BHLHB9-205ENST00000457056 4082 ntAPPRIS P1 TSL 4 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 CCDC36-201ENST00000296449 2613 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01907-201ENST00000415174 2609 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 PSMD2-206ENST00000439383 2633 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 HSPA8P16-201ENST00000454171 1865 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AC125603.4-201ENST00000621942 2699 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AL359851.1-201ENST00000569460 4997 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 NR2F2-202ENST00000394171 3501 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MLH1-201ENST00000231790 2752 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF630-201ENST00000276054 2791 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 PSEN1-202ENST00000357710 2776 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 PRUNE1-204ENST00000368936 2788 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC02338-201ENST00000615202 2753 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 THY1-201ENST00000284240 3556 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 HMGB3-201ENST00000325307 3560 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 CR786580.1-201ENST00000417843 2878 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 PRKCH-211ENST00000555082 2932 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 DMD-212ENST00000378723 4645 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 NHS-204ENST00000615422 8860 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MEFV-202ENST00000339854 2959 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF195-204ENST00000354599 2970 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-1312P-201ENST00000362425 108 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 SNORA64.2-201ENST00000362696 132 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-944P-201ENST00000364023 107 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 OR2W5-201ENST00000366492 963 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AL162293.1-201ENST00000373508 2112 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 APOM-201ENST00000375916 1184 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-895P-201ENST00000384125 103 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR10B-201ENST00000385011 110 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR153-2-201ENST00000385225 87 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 SNORA74B-201ENST00000391100 201 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 SNORA40.6-201ENST00000391153 128 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 CCR3-203ENST00000395942 1201 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 MCF2L-206ENST00000397021 576 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AC079834.1-201ENST00000414016 421 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AC006509.2-201ENST00000419124 395 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AC114814.2-201ENST00000419195 485 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RPSAP59-201ENST00000421048 890 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AC114489.1-201ENST00000421619 395 ntTSL 3 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AL606490.3-201ENST00000422410 270 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AL929410.1-201ENST00000428250 154 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RPL34P27-201ENST00000428810 349 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RPL23AP1-201ENST00000428990 471 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RPL12P46-201ENST00000436610 195 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AL513122.2-201ENST00000437135 838 ntTSL 3 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RPSAP17-201ENST00000437336 883 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 KRTAP19-10P-201ENST00000445258 187 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 BANF1P5-201ENST00000445285 259 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 EEF1B2P3-201ENST00000447718 678 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RPL10P1-201ENST00000447844 644 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 AL355483.1-201ENST00000450469 237 ntTSL 3 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU7-59P-201ENST00000459101 61 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU7-141P-201ENST00000459304 62 ntBASIC1.8□□□□□ -2.12
KRTAP4-4Q9BYR3 ACA64.3-201ENST00000459613 127 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 243.2 ms