Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 RN7SKP266-201ENST00000410232 287 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AL137014.1-201ENST00000420490 1226 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 HMGB1P9-201ENST00000429856 646 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AL049745.1-201ENST00000433953 286 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AL663074.2-201ENST00000440621 479 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 BX248409.1-201ENST00000455497 255 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AL122020.1-201ENST00000472287 459 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 RNU6-885P-201ENST00000516607 104 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 IGHV4-55-201ENST00000520889 368 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 MIR6837-201ENST00000620884 64 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 MIR7641-1-201ENST00000627518 61 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AL359091.1-201ENST00000449048 1734 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AP004289.1-201ENST00000436307 2205 ntBASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
COL25A1Q9BXS0 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 IQCB2P-201ENST00000401788 1633 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 RNU5E-1-201ENST00000362477 120 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 RNU6-492P-201ENST00000363035 104 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 U8.4-201ENST00000363626 134 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 RNU6-770P-201ENST00000363929 105 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 RNU6-266P-201ENST00000364225 107 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 RNU6-108P-201ENST00000365558 107 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 RNY1P14-201ENST00000384426 108 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 RPL17P36-201ENST00000420302 549 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 PIGPP3-201ENST00000425307 415 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 MTND5P15-201ENST00000434246 349 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 MTCO3P45-201ENST00000443036 613 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 RNU6-150P-201ENST00000516237 95 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 TOMM20P2-201ENST00000540082 421 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 AC068831.4-201ENST00000556118 109 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 NCAPGP2-201ENST00000557911 754 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 AC104695.3-201ENST00000604052 296 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 AC133104.2-201ENST00000615272 193 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 AC007546.1-201ENST00000619452 559 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 AC132825.6-201ENST00000638861 357 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 AC009948.3-201ENST00000603415 1798 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 AL442128.2-201ENST00000620246 1824 ntBASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL25A1Q9BXS0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms