Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 AC010587.1-201ENST00000505809 469 ntBASIC6.59□□□□□ -1.35
SCG3Q8WXD2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 RN7SKP70-201ENST00000516655 271 ntBASIC6.59□□□□□ -1.35
SCG3Q8WXD2 SOD1P3-201ENST00000518682 454 ntBASIC6.59□□□□□ -1.35
SCG3Q8WXD2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 HMGB1P6-201ENST00000569046 646 ntBASIC6.59□□□□□ -1.35
SCG3Q8WXD2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 RPL29P33-201ENST00000587474 316 ntBASIC6.59□□□□□ -1.35
SCG3Q8WXD2 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 AC113139.1-201ENST00000605049 239 ntBASIC6.59□□□□□ -1.35
SCG3Q8WXD2 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.59□□□□□ -1.35
SCG3Q8WXD2 AL603758.1-201ENST00000618654 241 ntBASIC6.59□□□□□ -1.35
SCG3Q8WXD2 AC233309.1-201ENST00000619522 751 ntBASIC6.59□□□□□ -1.35
SCG3Q8WXD2 AC009248.2-201ENST00000619826 254 ntBASIC6.59□□□□□ -1.35
SCG3Q8WXD2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCG3Q8WXD2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
SCG3Q8WXD2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
SCG3Q8WXD2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.59□□□□□ -1.36
SCG3Q8WXD2 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SCG3Q8WXD2 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC134882.1-201ENST00000603738 1676 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 RNA5SP485-201ENST00000365053 119 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 RNU6-108P-201ENST00000365558 107 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC078974.1-201ENST00000411597 223 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC048351.1-201ENST00000420064 602 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC007568.1-201ENST00000422912 471 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 SETP9-201ENST00000423837 832 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 LINC00328-2P-201ENST00000436585 219 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 DNAJC19P5-201ENST00000443295 316 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC118758.1-202ENST00000454719 225 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 RPS3AP50-201ENST00000487064 803 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 GAPDHP56-201ENST00000506031 988 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 SCARNA5-201ENST00000516201 276 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC022861.1-201ENST00000522981 663 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 IGHV1-14-201ENST00000523391 241 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC087241.2-201ENST00000535801 324 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC023050.3-201ENST00000541142 333 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC107958.1-201ENST00000556576 290 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 MIR3118-1-201ENST00000581787 76 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 MIR4271-201ENST00000582451 67 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC004853.1-201ENST00000604902 698 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC114477.1-201ENST00000605097 605 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 U1.41-201ENST00000617626 165 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 TCL6_3.1-201ENST00000619064 137 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC089999.3-201ENST00000622440 577 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC061999.1-201ENST00000624454 177 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AP000432.2-201ENST00000624164 2048 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCG3Q8WXD2 AC110373.1-201ENST00000505994 3505 ntBASIC6.58□□□□□ -1.36
SCG3Q8WXD2 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SCG3Q8WXD2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCG3Q8WXD2 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms