Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AL049693.1-201ENST00000402760 611 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC10.15□□□□□ -0.78
TRIM41Q8WV44 GAPDHP49-201ENST00000421421 961 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 AC245884.2-201ENST00000426257 404 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 Z93242.1-201ENST00000427102 353 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 RPL7P11-201ENST00000437586 658 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 ACTR3P2-201ENST00000439585 1257 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC10.15□□□□□ -0.78
TRIM41Q8WV44 NPM1P39-201ENST00000449818 867 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC10.15□□□□□ -0.78
TRIM41Q8WV44 RPL35P6-201ENST00000490024 372 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 KCTD9P5-201ENST00000504141 1170 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 TPM3P3-201ENST00000521343 354 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 AP005597.4-201ENST00000526762 229 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC10.15□□□□□ -0.78
TRIM41Q8WV44 MIR4776-2-201ENST00000580204 80 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 AC006116.10-201ENST00000591836 581 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 AL136131.3-201ENST00000607600 188 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 AL021918.2-201ENST00000613415 194 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 MIR6837-201ENST00000620884 64 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 RMST_7.1-201ENST00000621935 268 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 AC005858.4-201ENST00000623191 700 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 AL596275.2-208ENST00000641192 594 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
TRIM41Q8WV44 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC10.15□□□□□ -0.78
TRIM41Q8WV44 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC10.15□□□□□ -0.78
TRIM41Q8WV44 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC10.15□□□□□ -0.79
TRIM41Q8WV44 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
TRIM41Q8WV44 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
TRIM41Q8WV44 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC10.15□□□□□ -0.79
TRIM41Q8WV44 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 AC006511.3-201ENST00000624929 1783 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 RPL23P2-201ENST00000320371 421 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 SNORA63C-201ENST00000364578 129 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 RNU6-809P-201ENST00000384461 107 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 MIR217-201ENST00000384817 110 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 RNU6-907P-201ENST00000390924 102 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 HMGB1P20-201ENST00000402555 677 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 RNU6ATAC34P-201ENST00000408879 121 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 NMD3P2-201ENST00000421815 761 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 ISCA1P6-201ENST00000427740 390 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 AC006480.1-201ENST00000449887 378 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 AL513533.1-201ENST00000453728 415 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 AC010307.1-201ENST00000467206 836 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 ST13P14-201ENST00000474095 734 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 RN7SL222P-201ENST00000476452 299 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 AC020661.2-201ENST00000560114 134 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 UGT2B26P-201ENST00000508672 1613 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 AC016583.1-201ENST00000624221 2431 ntBASIC10.14□□□□□ -0.79
TRIM41Q8WV44 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC10.14□□□□□ -0.79
TRIM41Q8WV44 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 SELENOWP1-201ENST00000322792 252 ntBASIC10.13□□□□□ -0.79
TRIM41Q8WV44 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 RNU6-533P-201ENST00000384144 107 ntBASIC10.13□□□□□ -0.79
TRIM41Q8WV44 MIR16-1-201ENST00000385271 89 ntBASIC10.13□□□□□ -0.79
TRIM41Q8WV44 AC116036.1-201ENST00000412199 367 ntBASIC10.13□□□□□ -0.79
TRIM41Q8WV44 SNRPEP10-201ENST00000420249 274 ntBASIC10.13□□□□□ -0.79
TRIM41Q8WV44 HMGB3P12-201ENST00000438745 556 ntBASIC10.13□□□□□ -0.79
TRIM41Q8WV44 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 RPL7P19-201ENST00000469948 618 ntBASIC10.13□□□□□ -0.79
TRIM41Q8WV44 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 AC138915.2-201ENST00000569776 97 ntBASIC10.13□□□□□ -0.79
TRIM41Q8WV44 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 AL355802.3-201ENST00000607571 545 ntBASIC10.13□□□□□ -0.79
TRIM41Q8WV44 AL133215.3-201ENST00000609801 448 ntBASIC10.13□□□□□ -0.79
TRIM41Q8WV44 TEX41-265ENST00000627785 704 ntTSL 5 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 AL121768.1-201ENST00000613917 2544 ntBASIC10.13□□□□□ -0.79
TRIM41Q8WV44 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC10.13□□□□□ -0.79
TRIM41Q8WV44 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms