Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.85□□□□□ -1.63
SNED1Q8TER0 AC011471.1-201ENST00000585766 187 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 DNAJC19P3-201ENST00000594491 331 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 AL160281.1-201ENST00000605307 311 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 BNIP3P19-201ENST00000605397 577 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 BNIP3P7-201ENST00000605641 516 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 RNU1-30P-201ENST00000606575 163 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 AC016957.2-201ENST00000616998 848 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 AL391597.1-201ENST00000618707 694 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 AC009269.6-201ENST00000621778 588 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 OR6C71P-202ENST00000641886 1107 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNED1Q8TER0 MAPK10-303ENST00000641324 3959 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SNED1Q8TER0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNED1Q8TER0 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNED1Q8TER0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNED1Q8TER0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNED1Q8TER0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNED1Q8TER0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 ZNF962P-201ENST00000443465 3140 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 SNORD3H-201ENST00000384486 214 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 RNU6-925P-201ENST00000384629 104 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 RPS23P10-201ENST00000416185 486 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 TCEA1P2-201ENST00000420496 906 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 AC092647.1-201ENST00000420654 287 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 AC073335.1-201ENST00000427776 363 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 Z74696.2-201ENST00000436514 498 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 MTND4P15-201ENST00000437913 1033 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 AL158053.1-201ENST00000441503 453 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 PPIAP3-201ENST00000450588 505 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 RN7SL293P-201ENST00000481765 281 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNED1Q8TER0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNED1Q8TER0 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 RNU6-513P-201ENST00000516104 104 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 AC007599.1-201ENST00000568688 1174 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 ZNF415P1-201ENST00000582279 1166 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 AC242628.1-201ENST00000606810 391 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 AC097478.2-201ENST00000610572 514 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 AC018816.2-201ENST00000621460 353 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 AC006840.1-201ENST00000623069 542 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 AP005264.7-201ENST00000625003 745 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
SNED1Q8TER0 AC032011.1-201ENST00000611703 1549 ntBASIC4.84□□□□□ -1.63
SNED1Q8TER0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNED1Q8TER0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.84□□□□□ -1.64
SNED1Q8TER0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SNED1Q8TER0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 AL591419.1-201ENST00000427423 339 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 AL645638.1-201ENST00000440519 361 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC005008.1-201ENST00000456151 612 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC008155.2-201ENST00000464337 397 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC106707.2-201ENST00000484182 374 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC119751.4-201ENST00000507498 357 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 CR383656.14-201ENST00000551951 406 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC025627.2-201ENST00000576220 160 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC244505.7-201ENST00000599675 272 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 AL159169.3-201ENST00000608871 561 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 RLIMP2-201ENST00000427891 1563 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC008079.2-201ENST00000623543 20396 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms