Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A1P61619 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SEC61A1P61619 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.34□□□□□ -1.71
SEC61A1P61619 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A1P61619 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A1P61619 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A1P61619 RNU1-94P-201ENST00000362627 173 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AP000580.1-201ENST00000404439 358 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A1P61619 TMBIM7P-201ENST00000418074 855 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SEC61A1P61619 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.34□□□□□ -1.71
SEC61A1P61619 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A1P61619 MTND1P20-201ENST00000430341 950 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A1P61619 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.34□□□□□ -1.71
SEC61A1P61619 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A1P61619 RPL12P3-201ENST00000440080 396 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A1P61619 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A1P61619 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A1P61619 TPTE2P6-202ENST00000445572 1007 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AC073850.1-201ENST00000449243 255 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A1P61619 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A1P61619 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A1P61619 AC005229.2-201ENST00000456995 399 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AC091180.1-201ENST00000462104 372 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 RN7SL329P-201ENST00000467740 299 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 TRBV8-2-201ENST00000475637 270 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.34□□□□□ -1.71
SEC61A1P61619 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.34□□□□□ -1.71
SEC61A1P61619 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A1P61619 RNU6-347P-201ENST00000516658 105 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 RN7SKP66-201ENST00000516681 231 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AC012400.1-201ENST00000518452 381 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A1P61619 AC022882.1-201ENST00000532142 501 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.34□□□□□ -1.71
SEC61A1P61619 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.34□□□□□ -1.71
SEC61A1P61619 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A1P61619 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A1P61619 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A1P61619 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.34□□□□□ -1.71
SEC61A1P61619 NBEAP1-201ENST00000554452 979 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 HIGD1AP17-201ENST00000554576 276 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A1P61619 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A1P61619 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A1P61619 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.34□□□□□ -1.71
SEC61A1P61619 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A1P61619 AL163642.2-201ENST00000604722 1019 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AC105129.3-201ENST00000605455 485 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A1P61619 AL121890.2-201ENST00000617644 465 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AC118658.2-201ENST00000618697 459 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 AC068870.2-201ENST00000620635 389 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 MTND4P5-201ENST00000435821 1374 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.34□□□□□ -1.71
SEC61A1P61619 BTBD10P1-201ENST00000549824 1352 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A1P61619 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A1P61619 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A1P61619 AL137100.1-201ENST00000556703 1620 ntBASIC4.34□□□□□ -1.71
SEC61A1P61619 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SEC61A1P61619 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.34□□□□□ -1.71
SEC61A1P61619 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
SEC61A1P61619 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SEC61A1P61619 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SEC61A1P61619 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SEC61A1P61619 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SEC61A1P61619 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SEC61A1P61619 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.33□□□□□ -1.72
SEC61A1P61619 AL672167.1-205ENST00000641112 3080 ntBASIC4.33□□□□□ -1.72
SEC61A1P61619 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.33□□□□□ -1.72
SEC61A1P61619 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A1P61619 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A1P61619 TTC39DP-201ENST00000416781 1688 ntBASIC4.33□□□□□ -1.72
SEC61A1P61619 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SEC61A1P61619 PANDAR-201ENST00000629595 1506 ntBASIC4.33□□□□□ -1.72
SEC61A1P61619 SAMMSON-213ENST00000641336 1521 ntBASIC4.33□□□□□ -1.72
SEC61A1P61619 AC092435.4-201ENST00000623012 4159 ntBASIC4.33□□□□□ -1.72
SEC61A1P61619 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.33□□□□□ -1.72
SEC61A1P61619 Y_RNA.51-201ENST00000362725 102 ntBASIC4.33□□□□□ -1.72
SEC61A1P61619 RNA5SP90-201ENST00000364801 99 ntBASIC4.33□□□□□ -1.72
SEC61A1P61619 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SEC61A1P61619 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A1P61619 RNU6-157P-201ENST00000383957 107 ntBASIC4.33□□□□□ -1.72
SEC61A1P61619 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A1P61619 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.33□□□□□ -1.72
SEC61A1P61619 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.33□□□□□ -1.72
SEC61A1P61619 U3.32-201ENST00000408116 212 ntBASIC4.33□□□□□ -1.72
SEC61A1P61619 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.33□□□□□ -1.72
SEC61A1P61619 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.33□□□□□ -1.72
SEC61A1P61619 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.33□□□□□ -1.72
SEC61A1P61619 AC093162.1-201ENST00000419682 124 ntBASIC4.33□□□□□ -1.72
SEC61A1P61619 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms