Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
AP3S2P59780 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
AP3S2P59780 MIR331-201ENST00000362302 94 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 SNORA60-201ENST00000362396 134 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 RNA5SP189-201ENST00000364920 115 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
AP3S2P59780 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
AP3S2P59780 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.43□□□□□ -1.86
AP3S2P59780 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
AP3S2P59780 MIR765-201ENST00000390226 114 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
AP3S2P59780 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
AP3S2P59780 RPL7AP73-201ENST00000413490 353 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.43□□□□□ -1.86
AP3S2P59780 CHIAP3-201ENST00000423668 1133 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.43□□□□□ -1.86
AP3S2P59780 HMGB1P32-201ENST00000425971 565 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.43□□□□□ -1.86
AP3S2P59780 MTCYBP31-201ENST00000438855 1122 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 HMGB1P37-201ENST00000439613 609 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.43□□□□□ -1.86
AP3S2P59780 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.43□□□□□ -1.86
AP3S2P59780 CEACAMP6-201ENST00000452007 574 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 RPS20P4-201ENST00000461659 355 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 RPL7P16-201ENST00000479738 738 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 RNU4-18P-201ENST00000516751 149 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 RN7SKP209-201ENST00000516888 304 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 RNU6-1231P-201ENST00000517185 103 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.43□□□□□ -1.86
AP3S2P59780 MTND1P6-201ENST00000523621 946 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.43□□□□□ -1.86
AP3S2P59780 AC008083.2-201ENST00000546707 476 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 AC008147.3-201ENST00000548666 354 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
AP3S2P59780 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.43□□□□□ -1.86
AP3S2P59780 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
AP3S2P59780 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.43□□□□□ -1.86
AP3S2P59780 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.43□□□□□ -1.86
AP3S2P59780 MTCO2P22-201ENST00000603246 681 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 AC006254.3-201ENST00000603353 884 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 AC018754.1-201ENST00000607486 925 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 AC006946.3-201ENST00000609791 756 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 FAM27D1-201ENST00000612308 341 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 AL592295.2-201ENST00000612578 206 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 AC121761.2-201ENST00000617300 689 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 RPL23AP61-201ENST00000623642 466 ntBASIC3.43□□□□□ -1.86
AP3S2P59780 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
AP3S2P59780 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
AP3S2P59780 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
AP3S2P59780 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
AP3S2P59780 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3S2P59780 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S2P59780 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S2P59780 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S2P59780 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.42□□□□□ -1.86
AP3S2P59780 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
AP3S2P59780 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S2P59780 RNU6-666P-201ENST00000363499 107 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 RNU6-673P-201ENST00000365084 104 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 RN7SKP273-201ENST00000411392 314 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 AC004987.3-201ENST00000413879 771 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 MTND2P15-201ENST00000418575 892 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 UQCRBP1-201ENST00000421129 336 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 RPL21P109-201ENST00000422213 475 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 AL031736.2-201ENST00000426573 787 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S2P59780 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S2P59780 SETP5-201ENST00000437270 562 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S2P59780 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S2P59780 RPL7P1-201ENST00000468161 747 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 RPL7P9-201ENST00000468715 747 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 AC109327.1-201ENST00000471666 403 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.42□□□□□ -1.86
AP3S2P59780 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3S2P59780 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S2P59780 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.42□□□□□ -1.86
AP3S2P59780 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S2P59780 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S2P59780 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.42□□□□□ -1.86
AP3S2P59780 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S2P59780 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.42□□□□□ -1.86
AP3S2P59780 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S2P59780 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S2P59780 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S2P59780 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.42□□□□□ -1.86
AP3S2P59780 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S2P59780 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3S2P59780 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S2P59780 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 AL139089.1-201ENST00000620372 975 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 CR392039.4-201ENST00000624968 501 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 MIR7153-201ENST00000637758 57 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.42□□□□□ -1.86
AP3S2P59780 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3S2P59780 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3S2P59780 AL353743.4-201ENST00000422653 1547 ntBASIC3.42□□□□□ -1.86
AP3S2P59780 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S2P59780 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms