Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RPL5P23-201ENST00000496040 868 ntBASIC5.17□□□□□ -1.58
COPAP53621 BTF3P13-201ENST00000513224 490 ntBASIC5.17□□□□□ -1.58
COPAP53621 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.17□□□□□ -1.58
COPAP53621 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.17□□□□□ -1.58
COPAP53621 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 AC021006.3-201ENST00000530771 192 ntBASIC5.17□□□□□ -1.58
COPAP53621 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.17□□□□□ -1.58
COPAP53621 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.17□□□□□ -1.58
COPAP53621 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 AL442163.2-201ENST00000553912 710 ntBASIC5.17□□□□□ -1.58
COPAP53621 EDDM3DP-201ENST00000554692 434 ntBASIC5.17□□□□□ -1.58
COPAP53621 HMGB3P26-201ENST00000560051 582 ntBASIC5.17□□□□□ -1.58
COPAP53621 AC009117.1-201ENST00000563948 554 ntBASIC5.17□□□□□ -1.58
COPAP53621 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.17□□□□□ -1.58
COPAP53621 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPAP53621 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.17□□□□□ -1.58
COPAP53621 AC110743.1-201ENST00000584870 478 ntBASIC5.17□□□□□ -1.58
COPAP53621 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.17□□□□□ -1.58
COPAP53621 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.17□□□□□ -1.58
COPAP53621 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPAP53621 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.17□□□□□ -1.58
COPAP53621 MRPS35P3-201ENST00000603189 709 ntBASIC5.17□□□□□ -1.58
COPAP53621 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 AC123768.4-201ENST00000616244 701 ntBASIC5.17□□□□□ -1.58
COPAP53621 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.17□□□□□ -1.58
COPAP53621 ASNSP1-204ENST00000641977 1664 ntBASIC5.17□□□□□ -1.58
COPAP53621 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPAP53621 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.17□□□□□ -1.58
COPAP53621 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPAP53621 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPAP53621 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
COPAP53621 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COPAP53621 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COPAP53621 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.16□□□□□ -1.58
COPAP53621 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPAP53621 AC011447.7-201ENST00000624228 1590 ntBASIC5.16□□□□□ -1.58
COPAP53621 AL355852.1-201ENST00000454081 1771 ntBASIC5.16□□□□□ -1.58
COPAP53621 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COPAP53621 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPAP53621 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPAP53621 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
COPAP53621 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COPAP53621 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
COPAP53621 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
COPAP53621 AC074029.4-201ENST00000624796 1859 ntBASIC5.16□□□□□ -1.58
COPAP53621 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.16□□□□□ -1.58
COPAP53621 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPAP53621 HMGB1P5-201ENST00000255320 642 ntBASIC5.16□□□□□ -1.58
COPAP53621 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COPAP53621 Y_RNA.465-201ENST00000384293 102 ntBASIC5.16□□□□□ -1.58
COPAP53621 CYB5AP4-201ENST00000396692 399 ntBASIC5.16□□□□□ -1.58
COPAP53621 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.16□□□□□ -1.58
COPAP53621 OR51A3P-201ENST00000413596 924 ntBASIC5.16□□□□□ -1.58
COPAP53621 GTF2IP23-201ENST00000423746 351 ntBASIC5.16□□□□□ -1.58
COPAP53621 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.16□□□□□ -1.58
COPAP53621 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.16□□□□□ -1.58
COPAP53621 OR2AH1P-201ENST00000425717 928 ntBASIC5.16□□□□□ -1.58
COPAP53621 USP9YP9-201ENST00000429406 715 ntBASIC5.16□□□□□ -1.58
COPAP53621 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.16□□□□□ -1.58
COPAP53621 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.16□□□□□ -1.58
COPAP53621 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.16□□□□□ -1.58
COPAP53621 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.16□□□□□ -1.58
COPAP53621 AC008072.1-201ENST00000434254 824 ntBASIC5.16□□□□□ -1.58
COPAP53621 GTF2IP7-202ENST00000436677 309 ntBASIC5.16□□□□□ -1.58
COPAP53621 FGF7P5-201ENST00000441829 291 ntBASIC5.16□□□□□ -1.58
COPAP53621 Z99714.1-201ENST00000450463 807 ntBASIC5.16□□□□□ -1.58
COPAP53621 AC079776.3-201ENST00000450665 370 ntBASIC5.16□□□□□ -1.58
COPAP53621 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.16□□□□□ -1.58
COPAP53621 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.16□□□□□ -1.58
COPAP53621 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.16□□□□□ -1.58
COPAP53621 AC011979.1-201ENST00000472300 483 ntBASIC5.16□□□□□ -1.58
COPAP53621 AC010683.1-201ENST00000473673 378 ntBASIC5.16□□□□□ -1.58
COPAP53621 AC140172.1-201ENST00000502928 141 ntBASIC5.16□□□□□ -1.58
COPAP53621 DYNLL1P6-201ENST00000503440 264 ntBASIC5.16□□□□□ -1.58
COPAP53621 AC010486.2-201ENST00000505572 483 ntBASIC5.16□□□□□ -1.58
COPAP53621 AC097173.1-201ENST00000505862 819 ntBASIC5.16□□□□□ -1.58
COPAP53621 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.16□□□□□ -1.58
COPAP53621 FABP5P12-201ENST00000515543 389 ntBASIC5.16□□□□□ -1.58
COPAP53621 RNA5SP43-201ENST00000516559 110 ntBASIC5.16□□□□□ -1.58
COPAP53621 RNU5A-4P-201ENST00000516588 111 ntBASIC5.16□□□□□ -1.58
COPAP53621 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.16□□□□□ -1.58
COPAP53621 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COPAP53621 AP001317.1-201ENST00000531194 960 ntBASIC5.16□□□□□ -1.58
COPAP53621 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.16□□□□□ -1.58
COPAP53621 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.16□□□□□ -1.58
COPAP53621 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.16□□□□□ -1.58
COPAP53621 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.16□□□□□ -1.58
COPAP53621 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.16□□□□□ -1.58
COPAP53621 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.16□□□□□ -1.58
COPAP53621 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
COPAP53621 AC105254.2-201ENST00000603636 436 ntBASIC5.16□□□□□ -1.58
COPAP53621 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.16□□□□□ -1.58
COPAP53621 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
COPAP53621 AC105227.2-201ENST00000615075 605 ntBASIC5.16□□□□□ -1.58
COPAP53621 AC015914.2-201ENST00000618167 288 ntBASIC5.16□□□□□ -1.58
COPAP53621 AL157770.1-201ENST00000623049 439 ntBASIC5.16□□□□□ -1.58
COPAP53621 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.16□□□□□ -1.58
COPAP53621 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms