Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK7P50613 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDK7P50613 NPM1P13-201ENST00000452663 865 ntBASIC5.18□□□□□ -1.58
CDK7P50613 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK7P50613 AL354710.1-201ENST00000453641 246 ntBASIC5.18□□□□□ -1.58
CDK7P50613 CDC42P1-201ENST00000456658 548 ntBASIC5.18□□□□□ -1.58
CDK7P50613 AP000942.1-201ENST00000463969 747 ntBASIC5.18□□□□□ -1.58
CDK7P50613 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK7P50613 RPL21P129-201ENST00000491732 478 ntBASIC5.18□□□□□ -1.58
CDK7P50613 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK7P50613 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK7P50613 MTCO1P35-201ENST00000515270 228 ntBASIC5.18□□□□□ -1.58
CDK7P50613 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK7P50613 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK7P50613 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK7P50613 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK7P50613 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK7P50613 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK7P50613 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.18□□□□□ -1.58
CDK7P50613 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK7P50613 BNIP3P33-201ENST00000598912 569 ntBASIC5.18□□□□□ -1.58
CDK7P50613 AC093424.1-201ENST00000604999 338 ntBASIC5.18□□□□□ -1.58
CDK7P50613 AC015914.2-201ENST00000618167 288 ntBASIC5.18□□□□□ -1.58
CDK7P50613 AC123767.1-202ENST00000620407 817 ntBASIC5.18□□□□□ -1.58
CDK7P50613 RNA5SP196-201ENST00000625967 102 ntBASIC5.18□□□□□ -1.58
CDK7P50613 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK7P50613 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK7P50613 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
CDK7P50613 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDK7P50613 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CDK7P50613 AC063976.2-201ENST00000425667 3556 ntBASIC5.17□□□□□ -1.58
CDK7P50613 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK7P50613 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK7P50613 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK7P50613 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK7P50613 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK7P50613 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK7P50613 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK7P50613 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK7P50613 RNU4-68P-201ENST00000364314 141 ntBASIC5.17□□□□□ -1.58
CDK7P50613 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDK7P50613 AL590762.2-201ENST00000395798 571 ntBASIC5.17□□□□□ -1.58
CDK7P50613 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK7P50613 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK7P50613 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK7P50613 HIGD1AP12-201ENST00000427832 281 ntBASIC5.17□□□□□ -1.58
CDK7P50613 AC092634.2-201ENST00000428146 1010 ntBASIC5.17□□□□□ -1.58
CDK7P50613 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK7P50613 HMGB1P45-201ENST00000435986 653 ntBASIC5.17□□□□□ -1.58
CDK7P50613 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK7P50613 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK7P50613 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK7P50613 AL929288.2-201ENST00000446368 407 ntBASIC5.17□□□□□ -1.58
CDK7P50613 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK7P50613 BTF3P6-201ENST00000448054 499 ntBASIC5.17□□□□□ -1.58
CDK7P50613 ZNF886P-201ENST00000450781 723 ntBASIC5.17□□□□□ -1.58
CDK7P50613 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK7P50613 AC069528.1-202ENST00000482888 637 ntBASIC5.17□□□□□ -1.58
CDK7P50613 MTCO3P35-201ENST00000485582 781 ntBASIC5.17□□□□□ -1.58
CDK7P50613 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK7P50613 AC073073.1-201ENST00000493920 463 ntBASIC5.17□□□□□ -1.58
CDK7P50613 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK7P50613 HMGB3P16-201ENST00000508037 287 ntBASIC5.17□□□□□ -1.58
CDK7P50613 RN7SKP287-201ENST00000516546 266 ntBASIC5.17□□□□□ -1.58
CDK7P50613 Y_RNA.717-201ENST00000517106 92 ntBASIC5.17□□□□□ -1.58
CDK7P50613 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK7P50613 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK7P50613 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK7P50613 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.17□□□□□ -1.58
CDK7P50613 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK7P50613 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK7P50613 AC011477.5-201ENST00000586571 259 ntBASIC5.17□□□□□ -1.58
CDK7P50613 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK7P50613 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK7P50613 AL583856.2-201ENST00000606298 543 ntBASIC5.17□□□□□ -1.58
CDK7P50613 MIR7973-1-201ENST00000614683 76 ntBASIC5.17□□□□□ -1.58
CDK7P50613 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK7P50613 ZYXP1-201ENST00000617638 118 ntBASIC5.17□□□□□ -1.58
CDK7P50613 AC139769.3-201ENST00000618383 175 ntBASIC5.17□□□□□ -1.58
CDK7P50613 AC006963.1-201ENST00000624003 1052 ntBASIC5.17□□□□□ -1.58
CDK7P50613 AP000843.1-201ENST00000624880 701 ntBASIC5.17□□□□□ -1.58
CDK7P50613 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK7P50613 OR6C71P-202ENST00000641886 1107 ntBASIC5.17□□□□□ -1.58
CDK7P50613 TTC39DP-201ENST00000416781 1688 ntBASIC5.17□□□□□ -1.58
CDK7P50613 ASNSP1-204ENST00000641977 1664 ntBASIC5.17□□□□□ -1.58
CDK7P50613 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CDK7P50613 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CDK7P50613 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK7P50613 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDK7P50613 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK7P50613 AL121657.1-201ENST00000327215 531 ntBASIC5.16□□□□□ -1.58
CDK7P50613 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK7P50613 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK7P50613 RNU1-64P-201ENST00000365443 163 ntBASIC5.16□□□□□ -1.58
CDK7P50613 RNU6-549P-201ENST00000384433 107 ntBASIC5.16□□□□□ -1.58
CDK7P50613 MIR659-201ENST00000384963 97 ntBASIC5.16□□□□□ -1.58
CDK7P50613 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK7P50613 AC025750.1-201ENST00000399891 379 ntBASIC5.16□□□□□ -1.58
CDK7P50613 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK7P50613 AC114814.2-201ENST00000419195 485 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms