Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC011373.1-201ENST00000607270 237 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 AL591167.1-201ENST00000607321 456 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 SNORA74.4-201ENST00000607595 199 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 MIR6811-201ENST00000620409 58 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.35□□□□□ -1.39
NFKB1P19838 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.35□□□□□ -1.39
NFKB1P19838 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.35□□□□□ -1.39
NFKB1P19838 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NFKB1P19838 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NFKB1P19838 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
NFKB1P19838 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
NFKB1P19838 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NFKB1P19838 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NFKB1P19838 AL161912.4-201ENST00000623889 2468 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.35□□□□□ -1.39
NFKB1P19838 TMCC1P1-201ENST00000518897 1980 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NFKB1P19838 WDR95P-201ENST00000425638 1542 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.35□□□□□ -1.39
NFKB1P19838 AC003973.3-201ENST00000624863 2822 ntBASIC6.35□□□□□ -1.39
NFKB1P19838 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.35□□□□□ -1.39
NFKB1P19838 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.34□□□□□ -1.39
NFKB1P19838 AP002907.1-201ENST00000606361 1430 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.34□□□□□ -1.39
NFKB1P19838 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
NFKB1P19838 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.34□□□□□ -1.39
NFKB1P19838 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.34□□□□□ -1.39
NFKB1P19838 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NFKB1P19838 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.34□□□□□ -1.39
NFKB1P19838 RPL7P26-201ENST00000333817 754 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 RNU5E-1-201ENST00000362477 120 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 RNA5SP346-201ENST00000363541 121 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 Y_RNA.259-201ENST00000364619 101 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 SNORA43.1-201ENST00000364863 140 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NFKB1P19838 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
NFKB1P19838 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
NFKB1P19838 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 HMGA1P8-201ENST00000414130 321 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.34□□□□□ -1.39
NFKB1P19838 SLC35E1P1-201ENST00000419313 864 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.34□□□□□ -1.39
NFKB1P19838 AC233981.1-201ENST00000423224 461 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.34□□□□□ -1.39
NFKB1P19838 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.34□□□□□ -1.39
NFKB1P19838 SRIP2-201ENST00000428470 166 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 AC094019.1-201ENST00000434678 472 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 AL627308.1-201ENST00000435693 821 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 LINC00328-2P-201ENST00000436585 219 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.34□□□□□ -1.39
NFKB1P19838 AC079922.1-201ENST00000443291 359 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.34□□□□□ -1.39
NFKB1P19838 SBDSP1-204ENST00000453858 737 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 RPL23AP71-201ENST00000470966 469 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 RPSAP51-201ENST00000497462 645 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.34□□□□□ -1.39
NFKB1P19838 BTF3P13-201ENST00000513224 490 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.34□□□□□ -1.39
NFKB1P19838 AP001858.2-201ENST00000536213 601 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.34□□□□□ -1.39
NFKB1P19838 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.34□□□□□ -1.39
NFKB1P19838 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.34□□□□□ -1.39
NFKB1P19838 RPL26P30-202ENST00000602923 645 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.34□□□□□ -1.39
NFKB1P19838 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.34□□□□□ -1.39
NFKB1P19838 AC010149.2-201ENST00000637608 315 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 AC116667.2-201ENST00000641075 823 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NFKB1P19838 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.34□□□□□ -1.39
NFKB1P19838 DDX18P4-201ENST00000511690 1966 ntBASIC6.34□□□□□ -1.39
NFKB1P19838 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NFKB1P19838 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.34□□□□□ -1.39
NFKB1P19838 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NFKB1P19838 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
NFKB1P19838 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NFKB1P19838 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
NFKB1P19838 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
NFKB1P19838 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
NFKB1P19838 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NFKB1P19838 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NFKB1P19838 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
NFKB1P19838 HSPD1P8-201ENST00000400121 1658 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.33□□□□□ -1.4
NFKB1P19838 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.33□□□□□ -1.4
NFKB1P19838 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NFKB1P19838 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NFKB1P19838 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NFKB1P19838 MIR369-201ENST00000362155 70 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 RNU1-49P-201ENST00000363468 159 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms