Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 OR5BE1P-202ENST00000641168 1176 ntBASIC4.76□□□□□ -1.65
TOP1P11387 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.76□□□□□ -1.65
TOP1P11387 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.76□□□□□ -1.65
TOP1P11387 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TOP1P11387 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
TOP1P11387 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TOP1P11387 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TOP1P11387 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.76□□□□□ -1.65
TOP1P11387 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.76□□□□□ -1.65
TOP1P11387 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
TOP1P11387 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TOP1P11387 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TOP1P11387 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TOP1P11387 GCNT6-201ENST00000379591 934 ntBASIC4.75□□□□□ -1.65
TOP1P11387 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.75□□□□□ -1.65
TOP1P11387 PGBD4P8-201ENST00000412993 562 ntBASIC4.75□□□□□ -1.65
TOP1P11387 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.75□□□□□ -1.65
TOP1P11387 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.75□□□□□ -1.65
TOP1P11387 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TOP1P11387 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.75□□□□□ -1.65
TOP1P11387 AL121877.1-201ENST00000453704 622 ntBASIC4.75□□□□□ -1.65
TOP1P11387 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.75□□□□□ -1.65
TOP1P11387 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.75□□□□□ -1.65
TOP1P11387 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.75□□□□□ -1.65
TOP1P11387 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.75□□□□□ -1.65
TOP1P11387 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.75□□□□□ -1.65
TOP1P11387 DEFB109D-201ENST00000529497 240 ntBASIC4.75□□□□□ -1.65
TOP1P11387 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.75□□□□□ -1.65
TOP1P11387 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.75□□□□□ -1.65
TOP1P11387 AC025627.2-201ENST00000576220 160 ntBASIC4.75□□□□□ -1.65
TOP1P11387 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.75□□□□□ -1.65
TOP1P11387 MIR6868-201ENST00000611215 58 ntBASIC4.75□□□□□ -1.65
TOP1P11387 AC233309.1-201ENST00000619522 751 ntBASIC4.75□□□□□ -1.65
TOP1P11387 AC000123.2-201ENST00000623124 461 ntBASIC4.75□□□□□ -1.65
TOP1P11387 AC008785.1-201ENST00000624475 456 ntBASIC4.75□□□□□ -1.65
TOP1P11387 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.75□□□□□ -1.65
TOP1P11387 MIR6715B-201ENST00000637172 77 ntBASIC4.75□□□□□ -1.65
TOP1P11387 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TOP1P11387 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TOP1P11387 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TOP1P11387 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.75□□□□□ -1.65
TOP1P11387 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
TOP1P11387 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TOP1P11387 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
TOP1P11387 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.74□□□□□ -1.65
TOP1P11387 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TOP1P11387 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TOP1P11387 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.74□□□□□ -1.65
TOP1P11387 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.74□□□□□ -1.65
TOP1P11387 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
TOP1P11387 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TOP1P11387 Y_RNA.126-201ENST00000363382 111 ntBASIC4.74□□□□□ -1.65
TOP1P11387 SNORD35B-201ENST00000363660 87 ntBASIC4.74□□□□□ -1.65
TOP1P11387 RN7SKP280-201ENST00000364196 304 ntBASIC4.74□□□□□ -1.65
TOP1P11387 RNU6-1279P-201ENST00000383917 103 ntBASIC4.74□□□□□ -1.65
TOP1P11387 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TOP1P11387 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TOP1P11387 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.74□□□□□ -1.65
TOP1P11387 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.74□□□□□ -1.65
TOP1P11387 RNU4-6P-201ENST00000410804 122 ntBASIC4.74□□□□□ -1.65
TOP1P11387 RNA5SP306-201ENST00000411087 107 ntBASIC4.74□□□□□ -1.65
TOP1P11387 RWDD4P2-201ENST00000426392 563 ntBASIC4.74□□□□□ -1.65
TOP1P11387 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.74□□□□□ -1.65
TOP1P11387 RPL7P31-201ENST00000450192 724 ntBASIC4.74□□□□□ -1.65
TOP1P11387 AC239809.1-201ENST00000450470 217 ntBASIC4.74□□□□□ -1.65
TOP1P11387 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.74□□□□□ -1.65
TOP1P11387 AC020898.1-201ENST00000474167 787 ntBASIC4.74□□□□□ -1.65
TOP1P11387 AC006517.1-201ENST00000480485 328 ntBASIC4.74□□□□□ -1.65
TOP1P11387 RWDD4P1-201ENST00000488019 565 ntBASIC4.74□□□□□ -1.65
TOP1P11387 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.74□□□□□ -1.65
TOP1P11387 MTND1P6-201ENST00000523621 946 ntBASIC4.74□□□□□ -1.65
TOP1P11387 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.74□□□□□ -1.65
TOP1P11387 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.74□□□□□ -1.65
TOP1P11387 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.74□□□□□ -1.65
TOP1P11387 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.74□□□□□ -1.65
TOP1P11387 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.74□□□□□ -1.65
TOP1P11387 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.74□□□□□ -1.65
TOP1P11387 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
TOP1P11387 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.74□□□□□ -1.65
TOP1P11387 AC087565.3-202ENST00000642085 1603 ntBASIC4.74□□□□□ -1.65
TOP1P11387 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.74□□□□□ -1.65
TOP1P11387 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TOP1P11387 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.74□□□□□ -1.65
TOP1P11387 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
TOP1P11387 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.73□□□□□ -1.65
TOP1P11387 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TOP1P11387 AC017002.4-201ENST00000604721 1525 ntBASIC4.73□□□□□ -1.65
TOP1P11387 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TOP1P11387 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.73□□□□□ -1.65
TOP1P11387 MAPK10-253ENST00000641010 4072 ntBASIC4.73□□□□□ -1.65
TOP1P11387 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TOP1P11387 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.73□□□□□ -1.65
TOP1P11387 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TOP1P11387 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TOP1P11387 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.73□□□□□ -1.65
TOP1P11387 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
TOP1P11387 SNORA37-201ENST00000384504 129 ntBASIC4.73□□□□□ -1.65
TOP1P11387 MIR320B1-201ENST00000390209 79 ntBASIC4.73□□□□□ -1.65
TOP1P11387 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TOP1P11387 CASKP1-201ENST00000412870 582 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms