Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL5A2P05997 AL365440.1-201ENST00000436135 2167 ntBASIC4.98□□□□□ -1.61
COL5A2P05997 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL5A2P05997 AC006484.1-201ENST00000435086 1884 ntBASIC4.97□□□□□ -1.61
COL5A2P05997 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL5A2P05997 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL5A2P05997 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL5A2P05997 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL5A2P05997 VDAC2P1-201ENST00000399358 958 ntBASIC4.97□□□□□ -1.61
COL5A2P05997 AC096644.3-201ENST00000416788 338 ntBASIC4.97□□□□□ -1.61
COL5A2P05997 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.97□□□□□ -1.61
COL5A2P05997 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.97□□□□□ -1.61
COL5A2P05997 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.97□□□□□ -1.61
COL5A2P05997 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.97□□□□□ -1.61
COL5A2P05997 AC017015.1-201ENST00000477387 286 ntBASIC4.97□□□□□ -1.61
COL5A2P05997 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.97□□□□□ -1.61
COL5A2P05997 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.97□□□□□ -1.61
COL5A2P05997 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.97□□□□□ -1.61
COL5A2P05997 SNORA70.18-201ENST00000516696 98 ntBASIC4.97□□□□□ -1.61
COL5A2P05997 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.97□□□□□ -1.61
COL5A2P05997 OR7E13P-201ENST00000526052 910 ntBASIC4.97□□□□□ -1.61
COL5A2P05997 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.97□□□□□ -1.61
COL5A2P05997 MIR4472-2-201ENST00000582069 67 ntBASIC4.97□□□□□ -1.61
COL5A2P05997 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.97□□□□□ -1.61
COL5A2P05997 MIR8057-201ENST00000620957 69 ntBASIC4.97□□□□□ -1.61
COL5A2P05997 AL118508.4-201ENST00000624142 1176 ntBASIC4.97□□□□□ -1.61
COL5A2P05997 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL5A2P05997 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.61
COL5A2P05997 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.61
COL5A2P05997 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.96□□□□□ -1.61
COL5A2P05997 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL5A2P05997 RNA5SP50-201ENST00000363731 107 ntBASIC4.96□□□□□ -1.62
COL5A2P05997 SNORA48.2-201ENST00000390926 124 ntBASIC4.96□□□□□ -1.62
COL5A2P05997 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.96□□□□□ -1.62
COL5A2P05997 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.96□□□□□ -1.62
COL5A2P05997 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.96□□□□□ -1.62
COL5A2P05997 GEMIN8P3-201ENST00000445417 720 ntBASIC4.96□□□□□ -1.62
COL5A2P05997 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.96□□□□□ -1.62
COL5A2P05997 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.96□□□□□ -1.62
COL5A2P05997 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL5A2P05997 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.96□□□□□ -1.62
COL5A2P05997 AC012493.2-201ENST00000595083 291 ntBASIC4.96□□□□□ -1.62
COL5A2P05997 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.96□□□□□ -1.62
COL5A2P05997 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL5A2P05997 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.96□□□□□ -1.62
COL5A2P05997 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL5A2P05997 AP000542.2-201ENST00000623199 6179 ntBASIC4.96□□□□□ -1.62
COL5A2P05997 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL5A2P05997 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.96□□□□□ -1.62
COL5A2P05997 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.96□□□□□ -1.62
COL5A2P05997 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL5A2P05997 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL5A2P05997 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL5A2P05997 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL5A2P05997 AL355596.1-201ENST00000565399 3996 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A2P05997 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COL5A2P05997 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A2P05997 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A2P05997 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.95□□□□□ -1.62
COL5A2P05997 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.95□□□□□ -1.62
COL5A2P05997 RNA5SP120-201ENST00000410900 112 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 AC017083.1-201ENST00000428093 483 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 RPL21P110-201ENST00000433345 446 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.95□□□□□ -1.62
COL5A2P05997 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.95□□□□□ -1.62
COL5A2P05997 AC084198.1-201ENST00000477747 402 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 RN7SL809P-201ENST00000482040 297 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 AC025554.1-201ENST00000505641 188 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 AC103843.2-201ENST00000530523 682 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.95□□□□□ -1.62
COL5A2P05997 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.95□□□□□ -1.62
COL5A2P05997 AL137843.1-201ENST00000605078 385 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 AC100814.1-201ENST00000606963 623 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 AL158211.2-201ENST00000607282 395 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 AL353684.1-201ENST00000622677 1120 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A2P05997 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A2P05997 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A2P05997 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A2P05997 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL5A2P05997 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
COL5A2P05997 AL356274.2-201ENST00000624379 3752 ntBASIC4.95□□□□□ -1.62
COL5A2P05997 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.95□□□□□ -1.62
COL5A2P05997 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL5A2P05997 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.94□□□□□ -1.62
COL5A2P05997 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.94□□□□□ -1.62
COL5A2P05997 SNORA71B-202ENST00000439232 272 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 RPL23AP12-201ENST00000467573 473 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL5A2P05997 OR52A4P-203ENST00000498233 1014 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.94□□□□□ -1.62
COL5A2P05997 IGKV2-38-201ENST00000517443 247 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.94□□□□□ -1.62
COL5A2P05997 AL161912.3-201ENST00000605404 628 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 AL513477.2-201ENST00000607858 568 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 AC007620.3-201ENST00000608131 497 ntBASIC4.94□□□□□ -1.62
COL5A2P05997 AP000240.1-201ENST00000609910 452 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms