Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC108479.1-201ENST00000431142 427 ntBASIC6.16□□□□□ -1.42
PDGFAP04085 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFAP04085 RPS15AP9-201ENST00000439856 381 ntBASIC6.16□□□□□ -1.42
PDGFAP04085 DNAJC19P5-201ENST00000443295 316 ntBASIC6.16□□□□□ -1.42
PDGFAP04085 TVP23CP1-201ENST00000450317 639 ntBASIC6.16□□□□□ -1.42
PDGFAP04085 HIGD1AP16-201ENST00000450986 258 ntBASIC6.16□□□□□ -1.42
PDGFAP04085 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFAP04085 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFAP04085 RPL32P9-201ENST00000487963 407 ntBASIC6.16□□□□□ -1.42
PDGFAP04085 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFAP04085 AL390198.2-201ENST00000510553 222 ntBASIC6.16□□□□□ -1.42
PDGFAP04085 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFAP04085 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFAP04085 RNU6-277P-201ENST00000516272 106 ntBASIC6.16□□□□□ -1.42
PDGFAP04085 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.16□□□□□ -1.42
PDGFAP04085 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFAP04085 BNIP3P22-201ENST00000593399 556 ntBASIC6.16□□□□□ -1.42
PDGFAP04085 PSMA6P4-201ENST00000603247 718 ntBASIC6.16□□□□□ -1.42
PDGFAP04085 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFAP04085 AL365204.3-201ENST00000612448 685 ntBASIC6.16□□□□□ -1.42
PDGFAP04085 AL356585.4-201ENST00000623078 1229 ntBASIC6.16□□□□□ -1.42
PDGFAP04085 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFAP04085 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFAP04085 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFAP04085 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFAP04085 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.16□□□□□ -1.42
PDGFAP04085 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFAP04085 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFAP04085 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFAP04085 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFAP04085 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFAP04085 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PDGFAP04085 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
PDGFAP04085 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFAP04085 AL592429.1-201ENST00000403909 1473 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PDGFAP04085 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFAP04085 AC009313.2-201ENST00000417893 1941 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFAP04085 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFAP04085 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFAP04085 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFAP04085 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFAP04085 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFAP04085 RNU1-84P-201ENST00000365447 164 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 MIR188-201ENST00000385034 86 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 RPL7P60-201ENST00000397636 735 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 AL136116.1-201ENST00000403591 381 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 GCNT1P4-201ENST00000404096 329 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 CYCSP17-201ENST00000407870 315 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFAP04085 RPL36AP36-201ENST00000418616 301 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFAP04085 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFAP04085 GAPDHP33-201ENST00000443168 1013 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFAP04085 VN1R38P-201ENST00000450265 887 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 AC087879.1-201ENST00000474343 374 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 AC233702.1-201ENST00000482905 502 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFAP04085 RNU6-1220P-201ENST00000517126 108 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFAP04085 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFAP04085 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.15□□□□□ -1.42
PDGFAP04085 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFAP04085 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFAP04085 AL358913.1-201ENST00000554342 121 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFAP04085 AC124916.2-201ENST00000604416 224 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 U1.41-201ENST00000617626 165 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
PDGFAP04085 AC000123.2-201ENST00000623124 461 ntBASIC6.15□□□□□ -1.42
PDGFAP04085 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFAP04085 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFAP04085 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFAP04085 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFAP04085 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFAP04085 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
PDGFAP04085 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFAP04085 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFAP04085 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.15□□□□□ -1.43
PDGFAP04085 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
PDGFAP04085 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.15□□□□□ -1.43
PDGFAP04085 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFAP04085 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 SMG1P7-201ENST00000565246 2704 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
PDGFAP04085 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFAP04085 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 AC006020.1-201ENST00000420179 1854 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFAP04085 Y_RNA.255-201ENST00000364581 97 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 SNORA70.3-201ENST00000365075 132 ntBASIC6.14□□□□□ -1.43
PDGFAP04085 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms