Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.3□□□□□ -1.56
CNOT4O95628 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CNOT4O95628 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 RNA5SP375-201ENST00000362975 119 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 RNA5SP242-201ENST00000364171 118 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 RNA5SP88-201ENST00000365560 109 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CNOT4O95628 SNORA51.12-201ENST00000384448 134 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.3□□□□□ -1.56
CNOT4O95628 AC009237.5-201ENST00000414271 501 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 RPL35AP3-201ENST00000414680 288 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 Z93019.1-201ENST00000416450 973 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 NMD3P2-201ENST00000421815 761 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AC093698.1-201ENST00000423843 571 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.3□□□□□ -1.56
CNOT4O95628 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.3□□□□□ -1.56
CNOT4O95628 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.3□□□□□ -1.56
CNOT4O95628 GAPDHP48-201ENST00000436626 961 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.3□□□□□ -1.56
CNOT4O95628 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.3□□□□□ -1.56
CNOT4O95628 AC092809.1-201ENST00000441469 474 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 GEMIN8P3-201ENST00000445417 720 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.3□□□□□ -1.56
CNOT4O95628 AL034418.1-201ENST00000448675 860 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.3□□□□□ -1.56
CNOT4O95628 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 SNORD42A-201ENST00000459584 64 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 OR52A4P-201ENST00000472867 958 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 RN7SL717P-201ENST00000478343 297 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 AC008628.2-201ENST00000502605 298 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.3□□□□□ -1.56
CNOT4O95628 AC027544.3-201ENST00000535082 757 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.3□□□□□ -1.56
CNOT4O95628 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.3□□□□□ -1.56
CNOT4O95628 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.3□□□□□ -1.56
CNOT4O95628 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.3□□□□□ -1.56
CNOT4O95628 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.3□□□□□ -1.56
CNOT4O95628 VN1R79P-201ENST00000593540 513 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AC013244.1-201ENST00000604279 193 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AC090578.1-201ENST00000604955 591 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AC005084.1-201ENST00000605160 304 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AL390208.1-201ENST00000605885 644 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 MIR6809-201ENST00000612189 116 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AC010133.1-201ENST00000615809 842 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AL355974.3-201ENST00000617383 467 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AL136228.1-201ENST00000622221 319 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 AL049767.1-202ENST00000637826 242 ntBASIC5.3□□□□□ -1.56
CNOT4O95628 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CNOT4O95628 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.3□□□□□ -1.56
CNOT4O95628 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNOT4O95628 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNOT4O95628 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNOT4O95628 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.29□□□□□ -1.56
CNOT4O95628 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNOT4O95628 THAP12P9-201ENST00000503971 2360 ntBASIC5.29□□□□□ -1.56
CNOT4O95628 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CNOT4O95628 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNOT4O95628 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNOT4O95628 AC027088.4-201ENST00000611559 1947 ntBASIC5.29□□□□□ -1.56
CNOT4O95628 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNOT4O95628 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNOT4O95628 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNOT4O95628 OR10R3P-201ENST00000361688 942 ntBASIC5.29□□□□□ -1.56
CNOT4O95628 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNOT4O95628 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNOT4O95628 Y_RNA.453-201ENST00000384223 109 ntBASIC5.29□□□□□ -1.56
CNOT4O95628 AL590002.1-201ENST00000406554 418 ntBASIC5.29□□□□□ -1.56
CNOT4O95628 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.29□□□□□ -1.56
CNOT4O95628 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.29□□□□□ -1.56
CNOT4O95628 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.29□□□□□ -1.56
CNOT4O95628 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.29□□□□□ -1.56
CNOT4O95628 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.29□□□□□ -1.56
CNOT4O95628 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.29□□□□□ -1.56
CNOT4O95628 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.29□□□□□ -1.56
CNOT4O95628 AL009174.1-201ENST00000426577 416 ntBASIC5.29□□□□□ -1.56
CNOT4O95628 AL512649.1-201ENST00000428997 581 ntBASIC5.29□□□□□ -1.56
CNOT4O95628 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.29□□□□□ -1.56
CNOT4O95628 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.29□□□□□ -1.56
CNOT4O95628 AL512605.1-202ENST00000441919 381 ntBASIC5.29□□□□□ -1.56
CNOT4O95628 AC244505.5-201ENST00000443639 207 ntBASIC5.29□□□□□ -1.56
CNOT4O95628 BMS1P10-201ENST00000443754 1120 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms