Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 BX276092.4-201ENST00000452056 248 ntBASIC6.66□□□□□ -1.34
CUX2O14529 BTF3P5-201ENST00000457252 467 ntBASIC6.66□□□□□ -1.34
CUX2O14529 RPL23AP65-201ENST00000475608 468 ntBASIC6.66□□□□□ -1.34
CUX2O14529 AC108022.1-201ENST00000493466 478 ntBASIC6.66□□□□□ -1.34
CUX2O14529 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.66□□□□□ -1.34
CUX2O14529 MTND1P6-201ENST00000523621 946 ntBASIC6.66□□□□□ -1.34
CUX2O14529 SNX6P1-201ENST00000601728 1224 ntBASIC6.66□□□□□ -1.34
CUX2O14529 AL049844.2-201ENST00000604280 628 ntBASIC6.66□□□□□ -1.34
CUX2O14529 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC6.66□□□□□ -1.34
CUX2O14529 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CUX2O14529 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
CUX2O14529 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC6.66□□□□□ -1.34
CUX2O14529 MUC2-202ENST00000613187 4845 ntBASIC6.66□□□□□ -1.34
CUX2O14529 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CUX2O14529 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CUX2O14529 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CUX2O14529 AC005005.4-201ENST00000623789 16698 ntBASIC6.66□□□□□ -1.34
CUX2O14529 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CUX2O14529 U3.19-201ENST00000390893 196 ntBASIC6.66□□□□□ -1.34
CUX2O14529 UBDP1-202ENST00000457888 382 ntBASIC6.66□□□□□ -1.34
CUX2O14529 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.66□□□□□ -1.34
CUX2O14529 RNU7-143P-201ENST00000516781 65 ntBASIC6.66□□□□□ -1.34
CUX2O14529 AC063950.1-201ENST00000552036 308 ntBASIC6.66□□□□□ -1.34
CUX2O14529 QTRT1P1-201ENST00000604344 1078 ntBASIC6.66□□□□□ -1.34
CUX2O14529 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC6.66□□□□□ -1.34
CUX2O14529 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CUX2O14529 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.65□□□□□ -1.34
CUX2O14529 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.65□□□□□ -1.34
CUX2O14529 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CUX2O14529 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
CUX2O14529 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
CUX2O14529 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CUX2O14529 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
CUX2O14529 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.65□□□□□ -1.35
CUX2O14529 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.65□□□□□ -1.35
CUX2O14529 TRGV5P-201ENST00000419915 354 ntBASIC6.65□□□□□ -1.35
CUX2O14529 AL671855.1-201ENST00000446875 1203 ntBASIC6.65□□□□□ -1.35
CUX2O14529 RBMY2UP-201ENST00000453474 324 ntBASIC6.65□□□□□ -1.35
CUX2O14529 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.65□□□□□ -1.35
CUX2O14529 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
CUX2O14529 AC087276.1-201ENST00000529659 480 ntBASIC6.65□□□□□ -1.35
CUX2O14529 MIR4276-201ENST00000584832 70 ntBASIC6.65□□□□□ -1.35
CUX2O14529 AC107993.1-201ENST00000591343 684 ntBASIC6.65□□□□□ -1.35
CUX2O14529 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.65□□□□□ -1.35
CUX2O14529 AC064801.1-201ENST00000612025 407 ntBASIC6.65□□□□□ -1.35
CUX2O14529 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.64□□□□□ -1.35
CUX2O14529 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC6.64□□□□□ -1.35
CUX2O14529 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CUX2O14529 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUX2O14529 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUX2O14529 SNORA3C-201ENST00000408792 125 ntBASIC6.64□□□□□ -1.35
CUX2O14529 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.64□□□□□ -1.35
CUX2O14529 RBMY1KP-201ENST00000423480 476 ntBASIC6.64□□□□□ -1.35
CUX2O14529 SKP1P3-201ENST00000429280 487 ntBASIC6.64□□□□□ -1.35
CUX2O14529 Z74696.2-201ENST00000436514 498 ntBASIC6.64□□□□□ -1.35
CUX2O14529 AC083863.1-201ENST00000438811 231 ntBASIC6.64□□□□□ -1.35
CUX2O14529 OR7E13P-201ENST00000526052 910 ntBASIC6.64□□□□□ -1.35
CUX2O14529 AC025627.2-201ENST00000576220 160 ntBASIC6.64□□□□□ -1.35
CUX2O14529 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.64□□□□□ -1.35
CUX2O14529 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUX2O14529 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUX2O14529 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CUX2O14529 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUX2O14529 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUX2O14529 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CUX2O14529 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CUX2O14529 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
CUX2O14529 ARF4P3-201ENST00000397387 509 ntBASIC6.63□□□□□ -1.35
CUX2O14529 RPL21P10-201ENST00000463521 490 ntBASIC6.63□□□□□ -1.35
CUX2O14529 AC080014.1-201ENST00000496877 1201 ntBASIC6.63□□□□□ -1.35
CUX2O14529 PHBP17-201ENST00000528576 541 ntBASIC6.63□□□□□ -1.35
CUX2O14529 AL451007.1-201ENST00000595491 289 ntBASIC6.63□□□□□ -1.35
CUX2O14529 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CUX2O14529 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CUX2O14529 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUX2O14529 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CUX2O14529 AC126323.6-202ENST00000568092 3511 ntBASIC6.62□□□□□ -1.35
CUX2O14529 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUX2O14529 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CUX2O14529 CRP-203ENST00000368111 512 ntTSL 3 BASIC6.62□□□□□ -1.35
CUX2O14529 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUX2O14529 MIR195-201ENST00000385194 87 ntBASIC6.62□□□□□ -1.35
CUX2O14529 RNA5SP293-201ENST00000410527 113 ntBASIC6.62□□□□□ -1.35
CUX2O14529 RN7SKP97-201ENST00000410966 333 ntBASIC6.62□□□□□ -1.35
CUX2O14529 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CUX2O14529 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.62□□□□□ -1.35
CUX2O14529 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.62□□□□□ -1.35
CUX2O14529 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.62□□□□□ -1.35
CUX2O14529 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CUX2O14529 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUX2O14529 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC6.62□□□□□ -1.35
CUX2O14529 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC6.62□□□□□ -1.35
CUX2O14529 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUX2O14529 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUX2O14529 MIR449A-201ENST00000362113 91 ntBASIC6.61□□□□□ -1.35
CUX2O14529 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.61□□□□□ -1.35
CUX2O14529 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CUX2O14529 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.61□□□□□ -1.35
CUX2O14529 AL365440.1-201ENST00000436135 2167 ntBASIC6.61□□□□□ -1.35
CUX2O14529 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 460.9 ms