Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
FOXN3O00409 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXN3O00409 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
FOXN3O00409 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXN3O00409 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXN3O00409 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FOXN3O00409 DDX18P5-201ENST00000534547 1306 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXN3O00409 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXN3O00409 LINC01109-201ENST00000603837 3081 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXN3O00409 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXN3O00409 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
FOXN3O00409 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXN3O00409 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXN3O00409 RNU6-146P-201ENST00000384602 108 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 RNU6-1151P-201ENST00000384684 107 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 Z97832.1-201ENST00000402490 328 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 PRRC2CP1-201ENST00000404428 159 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 MIR1178-201ENST00000408396 91 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXN3O00409 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXN3O00409 AC006960.1-201ENST00000419980 153 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXN3O00409 CKS1BP6-201ENST00000424932 240 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 AL031736.2-201ENST00000426573 787 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXN3O00409 ATP5F1P1-201ENST00000433775 569 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXN3O00409 RPL7P11-201ENST00000437586 658 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXN3O00409 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXN3O00409 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXN3O00409 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXN3O00409 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXN3O00409 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXN3O00409 AL122001.1-201ENST00000457027 370 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXN3O00409 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXN3O00409 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.23□□□□□ -1.57
FOXN3O00409 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXN3O00409 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXN3O00409 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.23□□□□□ -1.57
FOXN3O00409 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXN3O00409 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXN3O00409 Y_RNA.719-201ENST00000517156 106 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.23□□□□□ -1.57
FOXN3O00409 AC087808.1-201ENST00000520501 361 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 C1GALT1P3-201ENST00000522049 819 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXN3O00409 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXN3O00409 AL049839.1-201ENST00000556151 657 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.23□□□□□ -1.57
FOXN3O00409 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXN3O00409 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXN3O00409 AC233702.9-201ENST00000581528 203 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 AC007448.1-201ENST00000582714 234 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 AC009163.6-201ENST00000612367 342 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 AC069209.1-201ENST00000619282 651 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 SMG1P4-204ENST00000523028 4131 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
FOXN3O00409 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXN3O00409 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
FOXN3O00409 Z95327.2-201ENST00000414579 1873 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXN3O00409 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXN3O00409 AC114546.3-201ENST00000623582 1734 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXN3O00409 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXN3O00409 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXN3O00409 AC109315.1-201ENST00000584143 1347 ntBASIC5.23□□□□□ -1.57
FOXN3O00409 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
FOXN3O00409 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXN3O00409 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
FOXN3O00409 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXN3O00409 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
FOXN3O00409 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
FOXN3O00409 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
FOXN3O00409 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
FOXN3O00409 RNU4-4P-201ENST00000364588 130 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXN3O00409 SNORA70-201ENST00000384436 135 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 RNU6-1300P-201ENST00000391046 108 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXN3O00409 RPL23AP47-201ENST00000408017 460 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXN3O00409 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FOXN3O00409 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXN3O00409 AC019050.1-201ENST00000418508 492 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 AC093162.1-201ENST00000419682 124 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 AC007559.1-201ENST00000428736 355 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXN3O00409 GEMIN8P3-201ENST00000445417 720 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 AC073850.1-201ENST00000449243 255 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 RN7SL629P-201ENST00000489622 285 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXN3O00409 AC140172.1-201ENST00000502928 141 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 NDUFB4P12-201ENST00000513465 390 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms